| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2229 |
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| Symbol | |
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| ID | 4030020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2480347 |
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| End bp | 2480982 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637970688 |
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| Product | endopeptidase Clp |
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| Protein accession | YP_577481 |
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| Protein GI | 92117752 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.388128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGATC CAGTGGAAAC CTACATGAAC CTCGTGCCGA TGGTGGTCGA GCAGACCAAT
CGCGGCGAGA GGGCTTACGA CATCTTTTCC CGGCTGCTGA AGGAGCGCAT CATCTTCGTG
ACCGGGCCGG TCGAGGACAA CATGTCGATG CTGGTCGTCG CGCAGCTTCT GTTCCTCGAA
GCCGATAATC CCAAGAAGGA AATCTCGATG TACATCAATT CGCCGGGCGG CGTGGTGACA
TCGGGGCTCG CGATCTACGA CACGATGCAG TTCATTCGTC CGCCGGTCGC AACGTTGTGT
ACCGGACAGG CCGCGTCGAT GGGCTCGTTG CTGCTGGCTG CCGGCGAAAA GGATATGCGG
CATGCACTGC CGAACGCGCG CATCATGGTT CACCAGCCCT CCGGCGGCTT CCAGGGGCAG
GCGACGGACA TCATGCTGCA TGCCCAGGAA ATCCTGAATC TCAAGAAGCG GCTCAACGAG
ATCTACGTCA AGCATACGGG GCAGACCTAC AAGGCGATCG AGGACGCGCT GGAGCGCGAC
AAGTTCCTCA CCGCCGATAT GGCCCGCGAT TTCGGCCTTG TCGACAAGGT GATCGACAAG
CGCGCCGAAG AGCCGGCTGC CCCCAAAGCT TCATAG
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| Protein sequence | MRDPVETYMN LVPMVVEQTN RGERAYDIFS RLLKERIIFV TGPVEDNMSM LVVAQLLFLE
ADNPKKEISM YINSPGGVVT SGLAIYDTMQ FIRPPVATLC TGQAASMGSL LLAAGEKDMR
HALPNARIMV HQPSGGFQGQ ATDIMLHAQE ILNLKKRLNE IYVKHTGQTY KAIEDALERD
KFLTADMARD FGLVDKVIDK RAEEPAAPKA S
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