Gene Nham_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2213 
Symbol 
ID4030421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2462007 
End bp2463077 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content61% 
IMG OID637970670 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_577465 
Protein GI92117736 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0909649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAT TCTTCGCAGC CCCGTTCTGG ACGGACTTTC TCTGGCCGCT GATCGTGATG 
GTCGCGCAGA GCGTGTTGCT GCTCGTGGTG CTGCTGATCG CGATCGCCTA CATCCTGCTC
GCCGACCGCA AGATCTGGGC GGCGGTGCAG ATCAGGCGCG GCCCGAACGT GGTCGGGCCG
TGGGGTTTGC TGCAATCCTT CGCGGACCTG CTCAAGTTCG TGCTGAAGGA ACCGATTATT
CCGTCCGGCT CCAACAAGGG CGTGTTCCTG CTGGCGCCGC TGGTCACCTG CGTGCTGGCG
CTGGCGGCGT GGGCGGTGAT TCCGGTCAAT CTGAATTGGG TGATTTCCGA CATCAATGTC
GGGATTCTCT ACATCTTCGC GATTTCGTCG CTGTCGATCT ACGGCATCAT CATGGCCGGC
TGGTCGTCGA ACTCGAAATA TCCATTCCTT GCGGCATTGC GTTCGGCAGC GCAGATGGTC
TCGTACGAAG TCTCGATCGG CTTCGTTTTC ATCACGGTAT TGCTCTGCGC GGGCTCACTG
AACCTCTCGG CCATCGTCGA GGCGCAGCAT GTCCGGGGTC TCGGCAGCCT GATCGGATTG
CCATGGCTGA CATTCCTGAA CTGGTATTGG CTGCCTTTGC TGCCGATGTT CGTGGTGTTT
TACGTTTCGG CCCTGGCCGA GACCAACCGC CCGCCGTTCG ACCTGGTCGA GGCGGAATCG
GAACTCGTCG CAGGCTTCAT GGTCGAGTAC GGCTCGACGC CGTATCTGTT GTTCATGCTC
GGCGAGTACG TCGCGATCAC CACCATGTGC GCGATGGGCG CGATTCTCTT CATGGGCGGC
TGGCTGCCGC CGATCGATCT GCCGCCGTTC AACTGGGTGC CCGGCGTGAT CTGGTTCTCG
CTGAAACTGT TCTTCATGTT CTTCCTGTTC GCGATGGCGA AGGCGATCGT GCCGCGCTAT
CGCTACGATC AACTGATGCG GCTCGGCTGG AAGGTGTTTC TGCCGCTGTC GCTGGCTATG
GTGGTGATCG TGGCGGGCGT GTTGCAGTTC GCCGACATCG CGCCGAAGTG A
 
Protein sequence
MAEFFAAPFW TDFLWPLIVM VAQSVLLLVV LLIAIAYILL ADRKIWAAVQ IRRGPNVVGP 
WGLLQSFADL LKFVLKEPII PSGSNKGVFL LAPLVTCVLA LAAWAVIPVN LNWVISDINV
GILYIFAISS LSIYGIIMAG WSSNSKYPFL AALRSAAQMV SYEVSIGFVF ITVLLCAGSL
NLSAIVEAQH VRGLGSLIGL PWLTFLNWYW LPLLPMFVVF YVSALAETNR PPFDLVEAES
ELVAGFMVEY GSTPYLLFML GEYVAITTMC AMGAILFMGG WLPPIDLPPF NWVPGVIWFS
LKLFFMFFLF AMAKAIVPRY RYDQLMRLGW KVFLPLSLAM VVIVAGVLQF ADIAPK