| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2189 |
|---|
| Symbol | |
|---|
| ID | 4032685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 2436467 |
|---|
| End bp | 2437822 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637970646 |
|---|
| Product | acetyl-CoA carboxylase biotin carboxylase subunit |
|---|
| Protein accession | YP_577441 |
|---|
| Protein GI | 92117712 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACA AGATCCTGAT AGCCAATCGC GGCGAGATCG CCCTGCGTAT CCTGCGCGCC
TGCAAGGAAC TCGGTATCGC GACCGTCGCG GTGCATTCCA CCGCCGACGC GGACGCCATG
CATGTGCGGC TTGCGGACGA GAGCGTCTGT ATCGGACCGC CGCCGTCGAA GGACAGCTAT
CTCAACATTC CGGCGCTGCT GGCCGCCTGT GAGATCACCG GCGCCGATGC CGTGCATCCC
GGCTACGGCT TTTTGTCCGA GAACGCCCGC TTCGCCGAAA TCCTCGCCGA CCACGGCCTG
CATTTCATCG GCCCCAAGGC CGAACACATC CGCCTGATGG GCGACAAGAT CGAGGCCAAG
AAGACCGCGA AGCGGCTCGG CATTCCGGTG GTCCCGGGCT CCGACGGCGG CATCGGCCCG
GACCACGATG CCATGGCGAT CGCCAAGGCG ATCGGTTTTC CCGTGCTGGT GAAGGCGGCC
GCCGGCGGCG GCGGACGCGG CATGAAAATC GCAAAGACCC CCGACGACCT GATGATGGCG
ATCTCGACCG CCGGCAACGA GGCCAGGGCG GCGTTCGGCG ATGCTTCCGT TTATCTGGAG
AAATATTTGC AGAAGCCGCG CCACATCGAA ATCCAGGTGC TCGGCGATGG CCGCGGCGGC
GCCATTCATC TGGGAGAGCG CGACTGCTCG CTGCAACGGC GGCACCAGAA GGTCTGGGAA
GAAGGCCCCT CGCCCGTACT GACCGCCGCC GCCCGCAACA AGATCGGCGA AACGGTCGCC
AGGGCGATGC GTGAGATACA GTATCTGGGT GTCGGCACCA TCGAATTCCT TTACGAGGAC
GGCAAGTTCT ACTTCATCGA AATGAACACC CGGATCCAGG TCGAGCATCC GGTCACCGAA
ATGATCACCG ACATCGATCT GGTGCTGGAG CAGATCCGCA TCGCCGCCGG CGGCGACCTT
CCCGCGACTC AGAAGGAAAT CGTCGTGAAC GGCCATGCCA TCGAGTGCCG CATCAACGCG
GAGAATCCCG TCACTTTCCG GCCCTCGCCG GGCAGGATCA CGCGATTCCA TCCACCCGGC
GGGCTCGGCG TCCGGATCGA TTCCGCTGTT TATCAGGACT ATGTAATCCC GCCTTATTAC
GACTCGCTGG TGGGCAAGCT GATCGTCCAC GGCAAGACCC GCTCCGAATG CCTGATGAAG
CTGCGCCGGG CACTCGACGA GATGGTGGTG GATGGTGTCG AGACCACCTT ACCGCTGTTC
CGGGCGCTGG TCCGCGAGGC GAGCATCATC GACGGCGACT ACCACATCCA TTGGCTGGAG
CAGTACCTCG CCAGTGGCGG TATGACAGGA GCTTGA
|
|---|
| Protein sequence | MFDKILIANR GEIALRILRA CKELGIATVA VHSTADADAM HVRLADESVC IGPPPSKDSY
LNIPALLAAC EITGADAVHP GYGFLSENAR FAEILADHGL HFIGPKAEHI RLMGDKIEAK
KTAKRLGIPV VPGSDGGIGP DHDAMAIAKA IGFPVLVKAA AGGGGRGMKI AKTPDDLMMA
ISTAGNEARA AFGDASVYLE KYLQKPRHIE IQVLGDGRGG AIHLGERDCS LQRRHQKVWE
EGPSPVLTAA ARNKIGETVA RAMREIQYLG VGTIEFLYED GKFYFIEMNT RIQVEHPVTE
MITDIDLVLE QIRIAAGGDL PATQKEIVVN GHAIECRINA ENPVTFRPSP GRITRFHPPG
GLGVRIDSAV YQDYVIPPYY DSLVGKLIVH GKTRSECLMK LRRALDEMVV DGVETTLPLF
RALVREASII DGDYHIHWLE QYLASGGMTG A
|
|---|
| |