Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2187 |
Symbol | |
ID | 4032683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2435440 |
End bp | 2435910 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637970644 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_577439 |
Protein GI | 92117710 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.379626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAGGA CGATTTACGT GCTCAACGGC CCGAACCTTA ACATGCTCGG GACTCGGGAG CCGGAAACCT ATGGCCGCGC CACCCTGGCG GACGTCGAAA AGCTCTGCGC CGACACGGCC GGGGATTTTG GACTGGCCGC GGATTGCCGC CAGTCCAATC GCGAGGGCGA ACTGATCGAC TTCATCCACG ACGCCCATGC GAAGAAGGCG GCCGGCATCG TCATCAACGC CGGCGGCTAC TCGCACACCT CGGTTGCGCT TCACGATGCG CTGGTCGCGG TGAATATCCC GACCGTCGAG GTTCACATCA GCAATATCCA TGCGCGCGAG GACTTCCGCC ATCACTCGTT CACGGCCAGA GCCGCTTTTG CGAGCCTCTG CGGGTTCGGA ATTGATGGCT ACCGGCTCGC CATCAACGGT CTTGCCGCCA AAATCGGCGC GGTGAAGTCC GGCGCAAAAG TCAAATCCTG A
|
Protein sequence | MARTIYVLNG PNLNMLGTRE PETYGRATLA DVEKLCADTA GDFGLAADCR QSNREGELID FIHDAHAKKA AGIVINAGGY SHTSVALHDA LVAVNIPTVE VHISNIHARE DFRHHSFTAR AAFASLCGFG IDGYRLAING LAAKIGAVKS GAKVKS
|
| |