| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2180 |
|---|
| Symbol | |
|---|
| ID | 4032676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2427194 |
|---|
| End bp | 2428009 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637970638 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_577433 |
|---|
| Protein GI | 92117704 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0150751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGA CCGCGGAAAA GCGCGCCGCA TTCCACTCTC TGCACGAGAG CGGCTGCTTC
GTCATTCCCA ATCCTTGGGA TATCGGCAGC GCCAGGGTGT TGCAGGGCAT GGGCTTCAAG
GCGCTCGCGT CGACCAGCGC CGGGTTCGCA TGGTCGATCG GCAAGGCCGA CAACCACATC
ACGCTGGACG AGGTCTGCAG CCATCTGACC GCGCTGTGCG CAGCGGTCGA TCTGCCCATC
AACGCCGACT TCGAAAACGG CTTCGCCAAT GAGCCGGAAG GCGTTGCAGT CAACGTGTCG
CGCGCGGCGA AGACGGGTGT CGCCGGTCTG TCCATCGAGG ACTCCACCGG CGACCAGGAC
AAGCCTCTCT ACGACAAGAC GCTGGCGATC GAGCGTATCC GCGCGGCGCG CAAGGCTATC
GATGCCGATC GCAGCGGCAT GCTGCTGGTC GGCCGTTGCG AGGCTTTCCT GTGGGGGATG
CCCGATCTCA AGCTGACGAT CGACCGGTTG CAAGCCTATG CGGAGGCGGG GGCCGATTGC
CTTTATGCGC CGGGGTTGAA ATCGAAAGAC GACATTGCCG CCGCGGTGAA GGCCGTTCAT
CCCAAGCCGT TCAACCTGCT GATCGGTTGG CCCGGTCTCA GCGTCGCTGA GGCCGCCGAT
CTCGGCGTTC GCCGCATCAG CGTCGGCGGT GCCTTGGCGC GCGCGGCATG GGGCGGCTTT
TTAAGAGCCG CAAAGGAGAT TGCGGAGAAG GGTACGTTCG ACGGACTCGG CGCGGGCTAC
CCCGGCGGGG AACTGAACCG GATGTTTTCC GTCTGA
|
|---|
| Protein sequence | MSSTAEKRAA FHSLHESGCF VIPNPWDIGS ARVLQGMGFK ALASTSAGFA WSIGKADNHI
TLDEVCSHLT ALCAAVDLPI NADFENGFAN EPEGVAVNVS RAAKTGVAGL SIEDSTGDQD
KPLYDKTLAI ERIRAARKAI DADRSGMLLV GRCEAFLWGM PDLKLTIDRL QAYAEAGADC
LYAPGLKSKD DIAAAVKAVH PKPFNLLIGW PGLSVAEAAD LGVRRISVGG ALARAAWGGF
LRAAKEIAEK GTFDGLGAGY PGGELNRMFS V
|
|---|
| |