Gene Nham_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2169 
Symbol 
ID4029535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2409858 
End bp2412128 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content63% 
IMG OID637970628 
Productadenylate/guanylate cyclase 
Protein accessionYP_577424 
Protein GI92117695 
COG category[T] Signal transduction mechanisms 
COG ID[COG4252] Predicted transmembrane sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0505849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCTG CGGCGCGTTT GCGCGGCACC TTGCGCGTGC GGACCATGCT GGTGTGGGCG 
CGTCTGCGCC GGCTGATGCG CAACAAGAAT CTCCGCGCCG TCGGTGCGGC GGTGGCGACG
CTTGTGCTGC TCACCTCGCT GCGCGCTTAC GATCCGCGTA TCGTCACCGA ATTGAAGGAG
CGCACGTTCG ATACCTATCA GCGGCTCAAG CCGCGGGCCT ATACCGACCT GCCGGTGCGG
ATCGTCGATA TCGACGAGGC CTCGATCGCC GAATACGGAC AATGGCCGTG GCCGCGGACG
CGCCTTGCCG CGCTGACCCG CCGGCTTGCC GACCTTGGCG CCGGCGTGAT CGCTTACGAT
GTCATCTTTT CCGAGCCGGA TCGCACCACG CCGAGCCGGC TTGCCAACGA CTTGAAGGAC
TCCGGCGCGC CCGATCTGGA CCAGACCATG AAACTGCTCG CGAACCTGCC GGATCATGAT
CGGGCGTTCG CGGATGCAAT CGGCAAGACA GGGGTTGTAC TCGGCTTTGC CGCGACGAAC
GTCGCCAACG ACAAGCGTCC GCCGGTCCGG GCCGGGCTGG CGTTTGTCGG CGTCAATCCG
ACAAAGGTGC TTGCGCCGTT TCACGGTACG GTGTCGAGCT TGCCGATTTT CAACGAAGCT
GCCGCTGGCA TTGGCGGCAT CAACTTGAGT TCGCGCGATC GCGCCGGCAT CGTCCGCCGC
GTTCCCATGC TGTTTTCCGA CGGCGCGAAG GTCTATCCCG GCCTTGCGAT TGAGGCGCTG
CGTGTCGCCC AGAATCAGAA AAGCATCATC GTCCGCGGGA CCGGATCGAG CGGCGACAGC
GACACCGGTC ACGCGGCGCT GATCGATATG CGCGTCGGCG CTTTCAAGCT GCCGCTGACC
AGCAACGGCG AGTCATGGGT CTATTTCAGC CGCGATCGAC CGCAACGTTA CGTGTCGGTG
AAGGACATTC TCGATCCCGG CAAAGAGGCT GCGGTCAAGC CACTGATCGA TGGCGCGATC
GTTCTTGTCG GCGCATCGGC CGCGGGTCTG ATGGATGCGC GCGCGACGCC GCTCGGCGGG
CTGGTTCCGG GCGTGGCGAT CCAGGCACAA CTGATCGAGC AGATCCTCGC GCAGGACTTC
ATCGAGCGCC CGGACTGGAC CAACGGGCTC GAGATCGTTC TGACCGTATT GTTCGGCGCC
CTGGTCGCAG GCCTGGTCCT GGCGTTCGGC GCTCGGTTTT CATTCTATGC CGGCGTGGTG
GTGTTCGTGG CAGGGCTCGC GGGCTCGTGG ATCGCGTTCT CGCATTTCCG GCTGTTGATT
GATCCGATCT TCCCCTCGCT GGCGGCGCTG GCGGTCTATA TCGCCGTCGA GCGTGTGCTT
CACGTCGCCT CCGATCACGA GAAGAAGTTC GTGCGTCAGG CCTTCGGCCA GTATCTCGCA
CCGGAACTGC TCGCGCAGCT TGAAAATTCG CCGCAGGCGA TGCGGCTTGG CGGCGAGTCC
CGTGATATTT CCGTGATGTT CATGGATGTA CGCGGCTTTA CGCCGATCTC CGAAGCTCTG
ACTGCGACGG AACTTGTCGA TTTTATCAAT ACGCTGCTGT CGCCGCTGTC GGATGCGATC
CAGGATGAGT TGGGGACGAT CGACAAGTAC ATCGGCGATT CGATCATGGC GTTCTGGAAC
GCGCCGGTGG ACGTTCCCGA TCATGCGACC CGAGCCTGCC GCGCGGCGCT CAAGATGCGC
GCGGCGCTCG ACGCGCTCAA CGACTCCGAC GTCTTCGGGT TTTCCGCGCG CGGTTTCGAG
GACTCCCGCG TCAGGATCGG GGTCGGCATC AATGCCGGAC TGGCCTGCGT CGGTAACATG
GGATCGCAAA GGCGATTCAA TTATTCCGCC ATGGGTGACG TCGTGAACGT GGCGGCCCGG
ATCGAGTCGG CAAGCAAGGC GCTCAATGTG GACCTTCTGG TTTCGGAAGA CGTGGCGCAG
CGGGCAAAGG GGATCGCGCT GCTTGAGGCA GGTGAAATCC TGTTGAAAGG CAAGTCACGA
CCGACCAAGA TTTACGCGAT CGCGGGCGAT GAGGCGATGG CGGCGTCGCC GGAGTTTGCC
GAATGGAAAC GTCTGCACGG CGCGCTGCTG ACTGCGATCA AAGTTGGTCA TATGGACGAG
GCGGGCGCTG CCCTGGCGCG GTGCCGCGAA CTCGCCGGTG AGGAGATGCA GGATTTTTAC
AGCCATTTTG CCGAACAGAT CGCACCGTTC GACACCGCGC CGCTGCAATA G
 
Protein sequence
MKAAARLRGT LRVRTMLVWA RLRRLMRNKN LRAVGAAVAT LVLLTSLRAY DPRIVTELKE 
RTFDTYQRLK PRAYTDLPVR IVDIDEASIA EYGQWPWPRT RLAALTRRLA DLGAGVIAYD
VIFSEPDRTT PSRLANDLKD SGAPDLDQTM KLLANLPDHD RAFADAIGKT GVVLGFAATN
VANDKRPPVR AGLAFVGVNP TKVLAPFHGT VSSLPIFNEA AAGIGGINLS SRDRAGIVRR
VPMLFSDGAK VYPGLAIEAL RVAQNQKSII VRGTGSSGDS DTGHAALIDM RVGAFKLPLT
SNGESWVYFS RDRPQRYVSV KDILDPGKEA AVKPLIDGAI VLVGASAAGL MDARATPLGG
LVPGVAIQAQ LIEQILAQDF IERPDWTNGL EIVLTVLFGA LVAGLVLAFG ARFSFYAGVV
VFVAGLAGSW IAFSHFRLLI DPIFPSLAAL AVYIAVERVL HVASDHEKKF VRQAFGQYLA
PELLAQLENS PQAMRLGGES RDISVMFMDV RGFTPISEAL TATELVDFIN TLLSPLSDAI
QDELGTIDKY IGDSIMAFWN APVDVPDHAT RACRAALKMR AALDALNDSD VFGFSARGFE
DSRVRIGVGI NAGLACVGNM GSQRRFNYSA MGDVVNVAAR IESASKALNV DLLVSEDVAQ
RAKGIALLEA GEILLKGKSR PTKIYAIAGD EAMAASPEFA EWKRLHGALL TAIKVGHMDE
AGAALARCRE LAGEEMQDFY SHFAEQIAPF DTAPLQ