| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2153 |
|---|
| Symbol | |
|---|
| ID | 4030222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2391462 |
|---|
| End bp | 2392976 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637970611 |
|---|
| Product | phage terminase |
|---|
| Protein accession | YP_577408 |
|---|
| Protein GI | 92117679 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4626] Phage terminase-like protein, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.503371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTG AAGTTGTCAT TAAGTTCTTG GAATCGTTGA AAATTCCAGA AGGACCGCTG
GCTGGAAAAC CCCTCAAATT AGGCGAGTTC CAGAAACGGT TCGTCCGCGG CGCGCTGGAT
CCTGCAAACA TGGTCGCCTG CCTGTCGATC GGCAGAGGGA ATGCAAAAAC AGCTCTGTCC
GCCGGCATTT CGCTGGCCGC GCTGATGGGC ATCGTCGACA AACAGCCAAA GCGGGAAATC
CTTTTTGCGG CTCGGAATCG CGACCAATCG AAACTCGCCT TCACCTTCCT GGTCGGGTTC
ATCGAAAGCC TGCCGAAGCG CGAGCGCGAG AAATTCACGA TCCGCCGCGG TCAACGCCTT
GAGGTAGAAT ACAGCGGCAA CGGTGGCGGG CTGGCCCGCT GTATCGCGGC CGATGGCAAG
TCCATTTTAG GCGGCGCTCC GGTGCTTGCC GTGCTCGATG AGCGCGCCGC GTGGGAGAAG
GAAAAGGGCG ATTCACTAGA AAATTCAATA CTTTCCGGGC TCGGGAAGCG AGCCGGCAAA
GCGATTTTAA TAAGTACGAG CGCTCCCGAC GATTCGAACA CGTTCAGCCG GTGGATGGAT
GACCCACCGC CCGGCACCTA TGTGCAGGAA CACCGGCCAC CGCCCGGATT GCCGGTCGAC
GATCTGGAAA GCCTCCTGAT CGCAAACCCT GGCGCTTCCG AAGGCATCGG CGCTTCTGCC
GACTGGTTAG TCTCGCAGGC TCGTAGAGCC TTGGCCCGCG GTGGTTCGGC GCTGTCGTCA
TTCCGCAACC TCAATAGAAA TGAACGTGTC GCATCGGATG ATCGTTCGGT TCTGCTGACG
ACGGATGAGT GGTTGTCGGC GGAAGTTTCG CTGGACGATC TGCCGCCGCG TCAGGGTGCC
TGCATTCTCG GCGTTGATTT GGGCGGTTCG CGCTCCATGT CCGCCGCTGC ATTCTATTTC
CCCGAGACCG GCCGCCTTGA AGCCTATGGC ACTTTTGCGA GCGTGCCGAA TTTGGCTGAC
CGCGGAGCCG CTGACGGCGT AGGGACTCGC TACGTCGAGA TGCACTCGCG CGGCGAATTG
CGAGTACTAG GCGAAAACAC TGTGCCGCCC GGCCCATGGT TGGCGGACGT TGCGCGTCTG
GCCGATGGTT ACCCGATTGC CTGCATTGTC GGCGACCGGT TCCGCTTCGC TGAATTTCAG
GAAGCGATGG TCGCGGCGAA TCTTCGCGTG CAGTTCGTGG CGCGCGGCAT GGGTTGGCGT
GATGGCTCGG AAGATTGCGA GCGTTTCCGG CGATCGTTGT TCGACGGGAA GGTCAAAACG
ACTCCGTCGC TGTTGCTACG CAGCGCCTTC GCCGACGCGA TCACGCTTAT CGACCCCTCG
GGCAATCACA AGCTGACAAA AAGTCGCTCG CTCGGCCGGA TCGACGCCTG CGTGGCGTCG
GTGTTGGCTG TTGCGCAAGG CGACCGCATG ACAGCGCGTC CTCAACGTAA AGCGCGAGTG
CCCGTATGGC TTTGA
|
|---|
| Protein sequence | MTAEVVIKFL ESLKIPEGPL AGKPLKLGEF QKRFVRGALD PANMVACLSI GRGNAKTALS
AGISLAALMG IVDKQPKREI LFAARNRDQS KLAFTFLVGF IESLPKRERE KFTIRRGQRL
EVEYSGNGGG LARCIAADGK SILGGAPVLA VLDERAAWEK EKGDSLENSI LSGLGKRAGK
AILISTSAPD DSNTFSRWMD DPPPGTYVQE HRPPPGLPVD DLESLLIANP GASEGIGASA
DWLVSQARRA LARGGSALSS FRNLNRNERV ASDDRSVLLT TDEWLSAEVS LDDLPPRQGA
CILGVDLGGS RSMSAAAFYF PETGRLEAYG TFASVPNLAD RGAADGVGTR YVEMHSRGEL
RVLGENTVPP GPWLADVARL ADGYPIACIV GDRFRFAEFQ EAMVAANLRV QFVARGMGWR
DGSEDCERFR RSLFDGKVKT TPSLLLRSAF ADAITLIDPS GNHKLTKSRS LGRIDACVAS
VLAVAQGDRM TARPQRKARV PVWL
|
|---|
| |