Gene Nham_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2150 
Symbol 
ID4030219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2389192 
End bp2389893 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content56% 
IMG OID637970609 
Productpeptidase U35, phage prohead HK97 
Protein accessionYP_577406 
Protein GI92117677 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAGT TCGCCACGAT CAACGGCGAA TTGGAATTGC GCGCCTCCCG GAGAACCGGG 
GGGCGTCGCA TCCGCGGCAG ATTCCCGTAC CGTTCAAAAG CCGTTCTAAG CGATGGTGGC
CGCAACGGCG GCAAACCACA GAAAGAGCAA TTCGAACCGG GCGCCTTTTC CTACTCGCTC
AAGTCGGATG CTGAAATTCA TTTGCTAAGC GGTCATGACT TCGCGAAACC GCTTGCCAGC
AAAAACACGG GGACGTTGAC GTTCCACGAT AGCAACGAGG CGCTGCAATT CGACGCTGAC
ATCCATCCTG AAATTCTCGA CACGAGCTAT GGTAGCGATC TTATTAAGCA GATTTCTTCT
GGCCTTGTTT TCGGATTGTC GCCTGGTTTC AGAATTCCGC CTCCATCTGC TGTGCCTGCG
GACAAAGCGC AGAAATTCGA GAACGAAGAT CCGAAGCTCG GTCGCGCGAT CATTCGCACG
ATTTTTGAAG CGATCCTGAC GGAATTGTCG ATCGTGACGC GGCCGGCATA TCCGGACGCG
AGCGTCACCA TGCACGACGC TCTCGGCAAC GTCATCAATC CCGACGATAT GACCGATGAG
GAAAAGATCG CTGCCGGCTG GACATACAAC GTCGCGGGAA TCTTGATCCC GCCGCCGGAC
ACAATCAAGC GCGCGATGCC CGCTGCGTTG AGATGGAGAT AA
 
Protein sequence
MDEFATINGE LELRASRRTG GRRIRGRFPY RSKAVLSDGG RNGGKPQKEQ FEPGAFSYSL 
KSDAEIHLLS GHDFAKPLAS KNTGTLTFHD SNEALQFDAD IHPEILDTSY GSDLIKQISS
GLVFGLSPGF RIPPPSAVPA DKAQKFENED PKLGRAIIRT IFEAILTELS IVTRPAYPDA
SVTMHDALGN VINPDDMTDE EKIAAGWTYN VAGILIPPPD TIKRAMPAAL RWR