| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2115 |
|---|
| Symbol | |
|---|
| ID | 4031945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2358722 |
|---|
| End bp | 2360947 |
|---|
| Gene Length | 2226 bp |
|---|
| Protein Length | 741 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637970573 |
|---|
| Product | polyphosphate kinase |
|---|
| Protein accession | YP_577372 |
|---|
| Protein GI | 92117643 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0855] Polyphosphate kinase |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.311137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATAT GGACCGACAT ATCAATGGAA TTAGTTCAAG CTATTGTTAT TGAAGAGAAA
AAGATAGATC CGGAACCCGA TTTCGCAATC CGGACCAGCC CGGAACGGTT CATCAATCGA
GAGCTGTCCT GGCTGAATTT CAATCGCCGC GTGCTTGAGG AGTCGGTCAA TCCCCGCCAT
CCCGCGCTCG AACGCGTCCG CTTCCTGTCG ATTTCCGCCA ATAACCTTGA CGAGTTCTTT
ATGGTGCGTG TCGCCGGCAT CAAGGCGCAG GTGCGGGAGG GAATCGCGGA GCGTAGTCCG
GATGGGCTGA CGCCGTCGGA GCAACTCGTT CTCATCAACG AAACCGTCTC GAATCTCGCG
AGCGATCAAC AGGCGATCTG GCGGGATCTG CGCAACGTGC TGACCGAGGT CGGCATCGTC
CTGATCGACG GCAAGGACGT CACCAAGGCT GAGCGGACCT GGATTGCGGA TCACTTTCTT
CGCAATATCT TCCCCTTGCT GACGCCGCTT GCCATCGATC CGGCCCATCC GTTTCCATTC
ATCCCAAGTC TTGGTTTTAC CGTCGCACTG CAGCTCGCGC GCGCCTCTGA CGGCAAGCCG
ATGAATGCGC TGATCCGTAT GCCCGGCAAG ATCGACCGGT TTCTGCGGCT GCCGCCGACC
GGCAAGGACG ACCCCGTCAG GGTGATCACG CTTGAGGGTG CCACCAGCCT GTTCATCGGC
CGGCTGTTTC CAGGCTACTC CGTTAAGGGG CAGGGCGCGT TTCGCATCAT CCGGGACTCT
GAGCTGGAGA TCGAGGAAGA GGCGGAAGAT CTGGTTCGCC TGTTCGAGAC CGCATTGAAG
CGCCGCCGTC GCGGCTCGGT CATCCGGCTT GAAATCGAAG CCGCAATGCC GGCCGAGCTG
CGTGCATTCG TTCAGCGGGC GTTATCGGCT GCCGACGACG AAGTGTTGCT GGTGGACGGC
GTCTTGGCCA TGAACGAACT GTCGCAACTG ACACGGCTCG ACCGGCCCGA CCTTGAATTC
GCGCCGTACG TCCCGCGCCA TCCCGAGCGC GTGCGCGATC ACGGCGGCGA CGTGTTCGCT
GCGATCCGGC AGAAGGACCT GATCGTTCAT CATCCTTATG AATCGTTCGA CGTCGTCGTG
CAGTTTCTGC AGCAGGCCGC GCGCGATCCT GACGTCGTTG CGATCAAGCA GACGCTCTAT
CGCACCTCCA ACAACTCGCC GATCGTACGG GCGCTGGCGG AGGCCGCGGA GGCGGGCAAG
TCGGTCACCG CGCTCGTCGA GATCAAGGCG CGGTTCGATG AAGAAGCCAA CATCCGATGG
GCGCGTGACC TCGAGCGCGC CGGCGTGCAG GTGGTTTACG GTTTCCTCGA ACTGAAGACG
CACGCCAAGC TGTCGCTGGT GGTGCGCCGG GAAGGCAGCA GTCTCGCGAC TTACGTTCAC
ACCGGTACCG GCAACTATCA CCCGGTGACC GCGCGCATCT ATACCGACCT GTCGTACTTT
ACATCGGACC CGATCATCGG CCGCGATGCG GCGCGCGTGT TCAATTACAT CACGGGCTAC
GCGGAGCCGA GGGACATCGA GAAGATGGCG GTGTCGCCGC TGACCTTGCG CAACCGGATT
CTCGACCACA TTCGCGACGA AACCGGTTTC GCCCGCCACG GCAAGCCGGC CGCGATCTGG
ATGAAGATGA ATGCGCTGGT CGATCCCGAT ATCATCGATG CGCTGTATGA AGCGTCCCAG
GCCGGTGTCT CAGTGGAGCT GATTGTACGC GGCATTTGCT GTCTGCGACC TGGGGTTCCC
GGATTGTCGG AAAACATTCG CGTCAAGTCC GTGATCGGCC GGTTTCTGGA ACACGGCCGG
ATTTACTGTT TTGGAATGGG GCAGAACATG CCCGGACCGA AGGCCGCTGT GTATATCTCG
TCCGCCGACA TGATGCCGCG CAACCTCGAC CGGCGCGTCG AAGTGCTGTG CCCGTTGCAA
AATGCGACGG TGCATCAGCA GGTTCTCGAG CAGATCATGG TCGCGAACCT GAAGGATACC
GAACAGAGCT GGCAGTTATT GCCGGATGGA TCATCAACGC GTATGAAGGC CGCGAAGGGT
GAGGAGCCCT TCAACCTGCA TAACTATTTC ATGACGAACC CGAGTTTGTC CGGCCGTGGA
AAGTCGCTCA AGGAATCCTC GCCGCGCCGC CTCACGCGTC GCGCAGAGCG GCAGCCGTCG
GCATAG
|
|---|
| Protein sequence | MRIWTDISME LVQAIVIEEK KIDPEPDFAI RTSPERFINR ELSWLNFNRR VLEESVNPRH
PALERVRFLS ISANNLDEFF MVRVAGIKAQ VREGIAERSP DGLTPSEQLV LINETVSNLA
SDQQAIWRDL RNVLTEVGIV LIDGKDVTKA ERTWIADHFL RNIFPLLTPL AIDPAHPFPF
IPSLGFTVAL QLARASDGKP MNALIRMPGK IDRFLRLPPT GKDDPVRVIT LEGATSLFIG
RLFPGYSVKG QGAFRIIRDS ELEIEEEAED LVRLFETALK RRRRGSVIRL EIEAAMPAEL
RAFVQRALSA ADDEVLLVDG VLAMNELSQL TRLDRPDLEF APYVPRHPER VRDHGGDVFA
AIRQKDLIVH HPYESFDVVV QFLQQAARDP DVVAIKQTLY RTSNNSPIVR ALAEAAEAGK
SVTALVEIKA RFDEEANIRW ARDLERAGVQ VVYGFLELKT HAKLSLVVRR EGSSLATYVH
TGTGNYHPVT ARIYTDLSYF TSDPIIGRDA ARVFNYITGY AEPRDIEKMA VSPLTLRNRI
LDHIRDETGF ARHGKPAAIW MKMNALVDPD IIDALYEASQ AGVSVELIVR GICCLRPGVP
GLSENIRVKS VIGRFLEHGR IYCFGMGQNM PGPKAAVYIS SADMMPRNLD RRVEVLCPLQ
NATVHQQVLE QIMVANLKDT EQSWQLLPDG SSTRMKAAKG EEPFNLHNYF MTNPSLSGRG
KSLKESSPRR LTRRAERQPS A
|
|---|
| |