| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2111 |
|---|
| Symbol | aspS |
|---|
| ID | 4031941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2353144 |
|---|
| End bp | 2354916 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637970569 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_577368 |
|---|
| Protein GI | 92117639 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGCT ATCGGTCCCA TACCTGCGGC GCGCTCCGCG ACAGCCACAT CGATCAGACG
GTCCGCCTAT CCGGCTGGTG CCATCGCATT CGCGACCACG GCGGGGTGCT GTTCATCGAC
CTGCGCGACC ACTATGGGTT GACTCAGTGC GTGGCTGATC CGGACTCGCC TGCCTTTGCG
CAGGCCGAGA AGTTGCGATC GGAATGGGTG GTCAGGATCG ACGGCAAGGC CCGGCTTCGC
CCCGCGGGCA CCGAGAATCC GGAACTGCCG ACCGGCCAGA TCGAAATCTA CATCAATGAG
ATCGAGGTGC TGGGCCCAGC CGACGAACTG CCGCTGCCGG TGTTCGGCGA GCAGGAATAT
CCAGAAGACA TAAGGCTTAA GTACCGTTTC CTCGACCTTC GTCGCGAGAA GCTTCACCAG
AACATCATGA CCCGCGGCGC CATCGTCGAT TCGATGCGCA AGCGCATGAA GGAGCAAGGA
TTCTTTGAAT TCCAGACGCC GATCCTGACG GCGTCGTCGC CGGAAGGCGC GCGCGACTTC
CTGGTGCCGA GCCGCATCCA TCCCGGCAAG TTCTACGCGC TGCCGCAGGC GCCGCAGCAG
TACAAGCAGT TGCTGATGAT GTCCGGCTTC GACCGCTACT TCCAGATCGC GCCGTGCTTC
CGCGACGAGG ACCCACGCGC CGACCGGCTG CCCGGCGAGT TCTACCAGCT CGATCTCGAG
ATGAGCTTTG TCGAGCAGGA TGATGTTTTT GCTGCAGTGG AGCCGGTCGT TACCGGCGTG
TTCGAGGAGT TCGCCAAGGG CAAGCCGGTG ACAAAGAACT GGCCGCGGAT TCCGTTCGCG
GAAAGCTTGC GCAAATACGG CACCGACAAG CCGGACCTGC GCAATCCGCT GCTGATGCAG
GATGTCTCCC AGCATTTCCG CGGCTCCGGC TTCAAGGTGT TCGCGCGGAT GCTCGAGGAT
TCGAAGAACC AGGTCTGGGC GATCCCGGGT CCGGGTGGCG GCAGCCGGGC GTTCTGCGAC
CGCATGAATT CATGGGCGCA GGGCGAGGGC CAGCCGGGGC TCGGCTACAT CATGTGGCGT
GAGGGAGGCG AGGGCGCGGG TCCGCTCGCC AACAATATCG GTCCGGAGCG CACCGAAGCG
ATCCGCCAGC AGCTCGGCCT CAAGGCGGGT GATGCGGCGT TCTTCGTCGC GGGCGATCCG
GCAAAATTCT GGAAGTTCGC TGGCCTTGCG CGCACCAAGC TCGGCGAGGA GCTGAACGTG
ATCGACAAGG ACAGGTTCGA GCTCGCATGG ATCGTCGACT TCCCGATGTA CGAATACAAC
GAAGATGAGA AGAAGGTCGA CTTCTCGCAC AACCCGTTTT CGATGCCGCA GGGCGGACTC
GATGCGCTCA ACAACCAGGA CCCGCTGACG ATCAAGGCGT TCCAGTACGA CATCACCTGC
AACGGCTACG AGATCGCCTC CGGCGGTATT CGTAACCACA GGCCGGAAGC CATGGTGAAG
GCGTTCGAGA TCGCGGGCTA TGGCGAAAAC GACGTGGTCG AGCGTTTCGG CGGCATGTAC
CGCGCGTTTC AATACGGCGC GCCGCCGCAT GGCGGCATGG CGGCGGGCGT CGATCGCGTC
GTCATGCTGC TCTGTGGCAC CACCAACCTG CGCGAAATCT CACTGTTTCC GATGAACCAG
CGGGCCGAAG ACCTCCTGAT GGGCGCGCCG TCCGACGTCA CGCCGAAGCA GTTGCGCGAG
CTTCACATTC GGCTCAATCT GCCGCAGGAC TAG
|
|---|
| Protein sequence | MHRYRSHTCG ALRDSHIDQT VRLSGWCHRI RDHGGVLFID LRDHYGLTQC VADPDSPAFA
QAEKLRSEWV VRIDGKARLR PAGTENPELP TGQIEIYINE IEVLGPADEL PLPVFGEQEY
PEDIRLKYRF LDLRREKLHQ NIMTRGAIVD SMRKRMKEQG FFEFQTPILT ASSPEGARDF
LVPSRIHPGK FYALPQAPQQ YKQLLMMSGF DRYFQIAPCF RDEDPRADRL PGEFYQLDLE
MSFVEQDDVF AAVEPVVTGV FEEFAKGKPV TKNWPRIPFA ESLRKYGTDK PDLRNPLLMQ
DVSQHFRGSG FKVFARMLED SKNQVWAIPG PGGGSRAFCD RMNSWAQGEG QPGLGYIMWR
EGGEGAGPLA NNIGPERTEA IRQQLGLKAG DAAFFVAGDP AKFWKFAGLA RTKLGEELNV
IDKDRFELAW IVDFPMYEYN EDEKKVDFSH NPFSMPQGGL DALNNQDPLT IKAFQYDITC
NGYEIASGGI RNHRPEAMVK AFEIAGYGEN DVVERFGGMY RAFQYGAPPH GGMAAGVDRV
VMLLCGTTNL REISLFPMNQ RAEDLLMGAP SDVTPKQLRE LHIRLNLPQD
|
|---|
| |