Gene Nham_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2079 
Symbol 
ID4031254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2317697 
End bp2318188 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID637970537 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_577336 
Protein GI92117607 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.180692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGTA GCGTGAACAA GGTCATTCTG ATCGGCAATC TCGGCGCCGA TCCCGAAATC 
AAGCGGACCC AGGACGGCCG GCCGATCGCT AATCTGCGGA TCGCCACCTC TGAAACCTGG
CGCGACAAGA CCAGCGGCGA GCGCAAGGAG AAAACCGAGT GGCACCGCGT CGTGATTTTC
AACGAAGGTT TGTGCAAGGT CGCCGAGCAG TATCTGAAGA AAGGTGCGAA GGTCTACATC
GAGGGTCAGT TGCAGACCCG CAAATGGACC GACCAGAGCG GCGTCGAAAA ATACTCCACC
GAAGTCGTGC TGCAGAATTT CAATTCGACG CTGACGATGC TCGATGGCCG TAACAGCGGC
GGCGGCGGCA ATTTCGGATC GGATGACTCC GGCGGCGATT TCGGGGCCGG AAGCCCGTCC
GGCGGTGCGC CGCGCCGTAC CGTTGCGGCC GGTGCCCGCC GCAGCGATAT GGACGACGAC
ATTCCGTTCT AG
 
Protein sequence
MAGSVNKVIL IGNLGADPEI KRTQDGRPIA NLRIATSETW RDKTSGERKE KTEWHRVVIF 
NEGLCKVAEQ YLKKGAKVYI EGQLQTRKWT DQSGVEKYST EVVLQNFNST LTMLDGRNSG
GGGNFGSDDS GGDFGAGSPS GGAPRRTVAA GARRSDMDDD IPF