| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2071 |
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| Symbol | |
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| ID | 4031245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2302269 |
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| End bp | 2303303 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637970528 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_577328 |
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| Protein GI | 92117599 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0757625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGCG TACTTGCTGT CATCTTCGCT ATCGCCGCCG GTCTTCCGTT GCAATCGGCC
TCCGCACAGG AGTCCGCGAA GGTGAAGACC ACGCTCGAAG CAGTCAAGAC GCGAGGCATG
CTGTCCTGTG GCGTGAGCCA GGGGTTGCCG GGGTTCTCGG CGCCTGACGA CAAAGGCAAC
TGGACCGGCC TCGATGTCGA CGTCTGTCGC GCAATCGCGG CAGTGGTGTT CAACGATCCG
ACCAAGGTCA AATTCGTTCC GCTGTCTGCC AAAGACCGGT TTATCGCCTT GCAATCCGGC
GAAATCGATG TGCTGTCGCG CAACACGACA TGGACGCTCT CGCGCGACAC GTCGCTGGGC
GCAAATTTCA CCGGCGTGAC CTATTACGAC GGACAGGGTT TTCTGGTCAG GAAATCGCTC
AAGGTCAATT CGGCGCTGGA ATTGAACAGC GCGTCCGTCT GCGTCCAGAC CGGCACCACG
ACCGAACAGA ATCTTGCCGA CTATTTCAAG AGCAACAAGA TGAAGTATGA GGTCATCGCG
TTCAGCACGG CCGACGAAAC CATCAAGGCC TACGAATCAG GCCGGTGCGA TGTGTTTACG
TCCGATATTT CGCAGCTCTA TGCGGAGCGG CTGAAGCTCT CCAATCCCGC CGATCACGCG
GTGTTGCCGG AGGTGATCTC GAAGGAGCCG CTCGGGCCGA TGGTGCGTCA TGGCGACGAT
CAGTGGTTTG ATCTCGTGAA GTGGACGCTG TTTGCGATGA TCGACGCGGA AGAACTCGGC
ATCACCCAGA AGAATGTCGA CGAGATGGCC AAATCGAACA ACCCGGAACT GAAACGCGTC
TTTGGGACCG ACGGCAATTT TGGTGAACAG CTTGGCGTGA CCAAGGATTG GGTGTCGCGC
ATCGTCAAAG CCGTCGGCAA TTACGGTGAG TCGTTTGATC GGAACGTCGG CGCCGGCTCG
AAGCTCGGGA TTGCGCGAGG GCTCAACAGG CTCTGGAACC AGGGCGGCAT TCAGTACGCG
CCGCCGATCC GTTAG
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| Protein sequence | MKCVLAVIFA IAAGLPLQSA SAQESAKVKT TLEAVKTRGM LSCGVSQGLP GFSAPDDKGN
WTGLDVDVCR AIAAVVFNDP TKVKFVPLSA KDRFIALQSG EIDVLSRNTT WTLSRDTSLG
ANFTGVTYYD GQGFLVRKSL KVNSALELNS ASVCVQTGTT TEQNLADYFK SNKMKYEVIA
FSTADETIKA YESGRCDVFT SDISQLYAER LKLSNPADHA VLPEVISKEP LGPMVRHGDD
QWFDLVKWTL FAMIDAEELG ITQKNVDEMA KSNNPELKRV FGTDGNFGEQ LGVTKDWVSR
IVKAVGNYGE SFDRNVGAGS KLGIARGLNR LWNQGGIQYA PPIR
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