| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2070 |
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| Symbol | |
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| ID | 4031244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2301042 |
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| End bp | 2302247 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637970527 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_577327 |
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| Protein GI | 92117598 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.380407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCCG AGCCTCGAAA ACCGCCGCTT CAGTTGTTCT TAAAGCTACG GCGCGCGCTT
GGCGGCAGGG CAGGTTGGGA CGGACTCGCG CTCCAGGTGC TGTTCGTCGC TGCGCTGGCA
TGGATCGGTT ATGAGATCGT GGCCAACGCT CGGGGAAACC TGGAGACGCA GCATGTCGCG
TCCGGCTTTG ATTTCATGTC GCGCACGGCC GGCTTTGGCG TCAGCCAGAG CCTGATTCCA
TATTCCGAGA CCGACACCTA CACGCGCGTA TTTCTGGTCG GCCTTCTCAA CACGTTGCTG
GTGGCCGTGG TCGGCATCTT CTTCGCGACG ATCATCGGCT TTATCGTGGC GCTTGGTCGG
CTGTCACCGA ACTGGCTGAT ATCGCGCATT TCCGGCGGCT ATGTCGAGCT GGTTCGAAAC
CTGCCGCTGC TGTTTCAAAT TCTGTTCTGG TATCTTGCTG TGCTGGGGGC GCTGCCGAGT
CCAAGGCAAA GCGTTTCAAT CTTCGACAGC TTCTTTCTCA ACAATCGCGG TCTCGTGATT
CCGAAGCCGA TCGGGCACGA GGGGCTTGTC GCCCTTATGA TCGCGATTGT GGCTGCCATC
GTCGGCTGTC TGCTTTTGCG CAGCTATTCG CGCCGCGCGC TGTTCCAAAG CGGACGAGTG
GTAATCGTCT GGCCCTACGT TTCTACGCTT CTGGTCGGCG TTCCGCTGGC CGTAATGATG
ATTTTCGGCG CTCCCTTCAC GTTCGAGATG CCTGTCCTGA AAGGATTCAA TTTCTCCGGC
GGAGCGCGCG TGACCCCGGA ATTCGTTGCG CTCGCCATCG CGCTTTCGAC ATATACGGCC
GCTTTCATCG CGGAAGTCGT GCGCGCCGGA ATCCTCTCGG TTCACAAAGG GCAGATGGAG
GCGGGGGCAT CGCTCGGGCT CTCGCGCGGA TCGACGCTGC GATTGATCGT GGTGCCGCAG
GCGATGCGGG TCATTCTGCC GCCGTTGACC AATCAGTATC TCAACCTCAC CAAGAATTCG
TCACTGGCTG TCGCCATCGG ATATCCGGAC CTGTTTTCGG TTTTTGCCGG AACGACGTTG
AGCCAGACCG GACAGGCCAT CGAAATCATC GCGATCACGA TGGGCGTTTA TCTGCTGATT
TCGCTGGTGA CCAGCACGAT CATGAGCTTC TACGGCTGGC GTCTTGCGCG GAGCATCGGC
GCATGA
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| Protein sequence | MAAEPRKPPL QLFLKLRRAL GGRAGWDGLA LQVLFVAALA WIGYEIVANA RGNLETQHVA
SGFDFMSRTA GFGVSQSLIP YSETDTYTRV FLVGLLNTLL VAVVGIFFAT IIGFIVALGR
LSPNWLISRI SGGYVELVRN LPLLFQILFW YLAVLGALPS PRQSVSIFDS FFLNNRGLVI
PKPIGHEGLV ALMIAIVAAI VGCLLLRSYS RRALFQSGRV VIVWPYVSTL LVGVPLAVMM
IFGAPFTFEM PVLKGFNFSG GARVTPEFVA LAIALSTYTA AFIAEVVRAG ILSVHKGQME
AGASLGLSRG STLRLIVVPQ AMRVILPPLT NQYLNLTKNS SLAVAIGYPD LFSVFAGTTL
SQTGQAIEII AITMGVYLLI SLVTSTIMSF YGWRLARSIG A
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