| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2069 |
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| Symbol | |
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| ID | 4031243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2299525 |
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| End bp | 2301045 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637970526 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_577326 |
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| Protein GI | 92117597 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.76581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC AGCCCACACT GTCGTTCGTT CGCGCCGATC TTGTTCCGGA GCGGCCCGCG
CCGATCAAAA CCATCGGCTT TGTGGGCTTT CTGCGGACCC GTCTGTTCAA TACCCCGACC
AATGCACTGC TGACCATCGT GGGTGCGTTG CTGCTCTGGT TCATCATTGT CCCCACGATC
CGGTTTCTTC TCGTGGACGC AGTCTGGGAA GGCAAGGATC GAACATCGTG TCTGGCTGCG
GATGCGGGAC AGTCGATCGG GGCATGTTGG CCGTTTGTCC AGGCGAAAAT CACGCAGTTC
ATCTACGGCT TTTATCCCGA GCCCGAACGC TGGCGGGTGA ATCTGACATT TCTGCTGGCG
GCTGTTTTGC TGCTGCCGCT TCTGATTCCG CGATTGCCTG CCAAAAGTCT CAACGCGGGC
GTGTTCTTTG TCGCCTTTCC CGTCGTGGCA TTTTTTCTGC TGCATGGCGG GGGCATCAAT
GGGTTCGGCG TAAGTTGGAC CGTCGGCATT CTGTCGAGCT TTGCAGACGG CGTAGGCAAT
GCCGGGCGGC AGCTCGCCGC CTCTGGAGAG GCAAGCGGAA TCGGTTCGAC CCTGTGGCTG
CTGGGAAATG CCGTTGCATG GATCGGCGAT GCGTTGAACT CGCTGGCGTG GCCCCTGATC
TGGCTGCGCG ACCGGATCCA AAACTCCGGT CAACCGGTCT GGTACGATTT GGCGTGTACC
GCTGCGATCG TTTCGCTGCT GCTCTTTCTT CTGAGCGGCG CCTTCCGCAC GGGCTGGCGC
GCGCTGCTCA CCAGCCTGAC GACGTTCGTC GGTATTGGTC TGGTGATTGC GGTGATGCAC
CTCGATCGCG GCGGCCTGCC GATCGTCAAT ACCCGGCTCT GGGGCGGTCT GCTGGTGACG
CTGGTGGTGT CGGTTACCGG CATCGTAGCT TCGATACCGA TCGGAATCGC GCTGGCACTT
GGACGACGCT CCACCATTCC GCTGATCCGG ATTTTCTCGA TCGCCTTCAT CGAGTTCTGG
CGCGGCATTC CACTGATCAC CGTGCTGTTT TTCGCGACTT ACATGCTGCC GCTTTTCCTC
CCCGGAAACT TCACCGTCGA TGGTCTGGTC CGGGTTTTGA TCGGCGTCGC GCTGTTCGCC
GGCGCCTATA ATGCCGAGGT TATTCGCGGC GGTCTGGCTG CGATCCCGCG CGGACAGGCG
GAGGCCGCCC ATGCGCTTGG CTTGTCGTAC TGGAAGACGA CAGGACTGAT CGTGATGCCG
CAGGCGTTGC GGCATGTCAT CCCCGGACTG GTCAACAGCT TTATCGCGTT GTTCAAGGAT
ACCTCGCTGG TCTCGATCGT CGCGCTGTTC GATCTGCTCG GGAGCTTGCG GGCCTCGTTC
GCAGATCCAA CGTGGGCGAC GCCGACCACC CTGTTCACAG GGTTTGCCTT CGCCGGAATT
ATCTATTTCG TGTTCTGCTT CGGCATGTCC CGATATTCAC TGTTCGTCGA ACACCGGCTG
AACGCACACC GGCGAAGCTG A
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| Protein sequence | MTDQPTLSFV RADLVPERPA PIKTIGFVGF LRTRLFNTPT NALLTIVGAL LLWFIIVPTI
RFLLVDAVWE GKDRTSCLAA DAGQSIGACW PFVQAKITQF IYGFYPEPER WRVNLTFLLA
AVLLLPLLIP RLPAKSLNAG VFFVAFPVVA FFLLHGGGIN GFGVSWTVGI LSSFADGVGN
AGRQLAASGE ASGIGSTLWL LGNAVAWIGD ALNSLAWPLI WLRDRIQNSG QPVWYDLACT
AAIVSLLLFL LSGAFRTGWR ALLTSLTTFV GIGLVIAVMH LDRGGLPIVN TRLWGGLLVT
LVVSVTGIVA SIPIGIALAL GRRSTIPLIR IFSIAFIEFW RGIPLITVLF FATYMLPLFL
PGNFTVDGLV RVLIGVALFA GAYNAEVIRG GLAAIPRGQA EAAHALGLSY WKTTGLIVMP
QALRHVIPGL VNSFIALFKD TSLVSIVALF DLLGSLRASF ADPTWATPTT LFTGFAFAGI
IYFVFCFGMS RYSLFVEHRL NAHRRS
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