| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2064 |
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| Symbol | |
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| ID | 4031485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2291087 |
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| End bp | 2294215 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637970521 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_577321 |
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| Protein GI | 92117592 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.730897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGTCT CCGAACCGTT TATTCGTCGT CCGATCGCAA CCTCCTTGCT CGGGATCGCG
TTGATGATCG GAGGCGCGCT CGGCTATTGG GCGTTGCCGA TCTCGGCTTT GCCGCAAGTC
GACTTCCCGA CAGTGCAGGT GAGGACCCAG TTGCCGGGCG CGAGTCCCGA TGTGGTTGCG
TCGCTGCTGA CCGCGCCGCT GGAACGCCAG CTCGGGCAGA TCCCATCGCT GTCGTCGATG
GCATCGACAA GCTCGTTCGG CGTCAGTCAG ATTTCCCTGC AATTCAACCT GGACCGCGAT
ATCGACGGCG CCACGCAGGA TGTGCAGGCG GCGATTAACG CCGCCGCCGG GATACTGCCG
AAAAACCTGC CGTATCCGCC GACATACGCC AAGGTGAATC CTGCCGACGC GCCGGTGATG
ACGCTCGCGC TGACGTCGGA CACGGTCTCG CTGCGCGCCA TGAGCGATAT TGCGGACACC
ATCCTGACCC AGCGTCTCAG TCAGATTTCG GGCGTGGGGC GCGTTTCCGT GCTCGGAGGT
CTGAAGCCGG CGGTGCGTGT CCAGGCCGAC CTCGCACGGC TGGCCGCCTA CGGCATTTCA
ATGGAAGATT TGCGCGCCGG GATTGCCGGC GCCAATGTTT CAGGCCCAAA GGGCTCGCTG
GACGGCGCGC AGCAAGCCTA CACCATCGCC GCCAACGACC AGATCGCGGT GGCGGACGCG
TACAAGCCCA TCATTATCGC CTATCGCAAC GGCTCTCCGG TCACGATTGG CGATGTCGCC
CAGATCGTCG ACGGACTGGA AAACGACCGC ACCGGCGGCT GGTATAACGG AACGCCGGCC
GTCATCATCG ATATCCAGCG CCAGCCCGGC GCCAATGTGA TCGAGGTCGT CCGGCAGATC
CGGGAGGAGA TTCCGAAGGT CCAGCGTGCG ATTCCCGCCG GTGTTAAACT GACGGTCGTC
AGCGATCGGA CCGTGACGAT CCGTGCCTCC GTCCACGACG TGCAATTCAC GCTCATTCTC
AGTGTCGTGC TGGTCACGCT CGTGGTGCTG CTTTTCCTGC GCTCGCTGCG GGCGACATTG
ATCGCGGGAG TGGCGCTGCC GCTGTCGCTG ATTACCAGTT TCGGCATCAT GTATTTCGCC
GGATTCAGCC TCGACAACCT GTCGCTGATG GCGCTGACGA TCGGCACCGG ATTCGTGGTC
GACGACGCCA TCGTGATGAT CGAAAACATC GTCCGTCACA TCGAGAACGG CGAGAGCGTC
ATGGAAGCCT CGCTCCGGGG TGCGAGCGAG ATCGGCTTTA CCGTGATTTC GCTGACGGTC
TCGCTGATCG CGGTGTTCAT TCCGCTGCTG TTCATGTCCG GGCTGGTCGG GAGGATGTTC
CGCGAATTTG CCCTGACCCT CACCATCGCG GTTGTCACGT CCGCTATCGT GTCGCTGACT
TTGACGCCGA TGATGTGCTC GCGGCTGCTG AAGCACTCCG GGGGGGAGCG AGCGGTTCCG
GGAATGGCGG CGGTCAGCCG CAGTATCGAT CGGATGGTCG AGTTCTACCA TCGTACGTTA
TTATGGGTGC TGCGGCATCA GCGCGCGACA CTGGTTGTGG TGTTTGCGAC AGTCGCCGCG
ACGATGGTCC TCTATGTCGT CGCGCCCAAG GGCTTTCTGC CCTTGCAGGA CACGGCATCG
ATCACCGCGG TGACTGAAGC GGGTCCGGAT GTATCCTTTG CCGAAATGCG AAAGCATCAA
GCCGAGGTGG CCAACGTCAT CAAAGAGGAT CCGGACGTCA CGGGCGTTGT ATCGGTCATT
GGTGCCGGCT CCGTGAATCC AACGACGAAT GTCGGACGCC TGGTGATGAC GTTGAAGCCG
CGGAGCGACC GCCGCGACGA TGTAGCTGTC GTTATCGCGC GGTTGAAGGA GCGCGTTGCC
CCGATCCCCG GCATGACGGT TTATTTTCAG CCGGTGCAGG ATGTCCAGAT CAGTACGCAG
TCGAGCCGTT CGCTATATCA GTACACCCTA ACGGGGACGG ATGCCGCCCA GGTTTCGGAG
TGGGCCCGCA AACTGGTTGC CGAACTGCGT CGCGATCCGC TGTTCCAGGA CGTATCATCC
GAAGCTCAGG AAAACGGACT GCGTGCAGCG CTGCACATCG ACCGCGCCCG CGCGGGCCAG
CTCGGCGTCA GCCTCCAGGG TGTCAACGAC ACGCTGAACG ATGCCTTCGC GCAACGGCAG
ATATCGACCG TTTACGGGCA GGCCAACCAA TATCGCGTCG TGCTGGAGGC CTTGCCGCAG
TATCAGCGCG ACCCCTCGAT CCTCTCCAAG CTTTATCTGC CGGGTCTTGC CGGCGCACAA
GTGCCGCTGT CCGCGGTCGC AACGCTGACC CGAACGACGG CGCCGCTGTC GATCTCGCAT
CACGCGCAAT TCCCGGCGAC GTCGCTCAGT TTCAACCTTG CTCCGGGAGA ATCGCTCGGC
GATGCCGTGG AGCGGGTCAA GACCATCGAG ACCCACATCG GCATGCCCTC AAGTATCGTC
GGTGTGTTCT CCGGCGATGC GGCGGAGTTC TCCAAATCGC TTGCCGGACA ACCCTGGCTG
ATCCTGGCTG CGCTGGTCAC GATCTACATC GTGCTGGGCG TATTGTACGA GAGCTACATT
CATCCGATCA CGATTCTCTC GACGCTGCCT TCGGCGGGTG TCGGCGCCAT TCTCGCGTTG
ATGCTGTTCG GACAGGATCT GTCCGTCATC GGCCTGATCG GCATCATTCT TCTGATGGGC
ATCGTGAAGA AGAACGCGAT CATGATGATC GATTTCGCGC TCGAGGCCGA GCGCCATCAG
GGCATGTCGC CGACCGAGGC GATCGTGCAG GCATGCCTGC TCCGGTTCAG GCCAATAATG
ATGACCACGC TGGCGGCGCT GTTCGGCGCG CTGCCGCTGG CGATCGAAAG CGGCACCGGC
GCGGAACTGC GATTTCCCCT TGGCATCTCG ATCATCGGCG GCCTGCTGCT CAGCCAGTTG
CTTACGCTTT ACACCACGCC CGTGATCTAT CTGGCGCTGG ATCGGCTGAA CAAGCGGATC
GAGAAAGCCG TTCCGACGGG CGGGCCGGAG CAGCCGCCGA TCGCAGGTAC GACCGAGGGA
ATGCAGTAG
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| Protein sequence | MGVSEPFIRR PIATSLLGIA LMIGGALGYW ALPISALPQV DFPTVQVRTQ LPGASPDVVA
SLLTAPLERQ LGQIPSLSSM ASTSSFGVSQ ISLQFNLDRD IDGATQDVQA AINAAAGILP
KNLPYPPTYA KVNPADAPVM TLALTSDTVS LRAMSDIADT ILTQRLSQIS GVGRVSVLGG
LKPAVRVQAD LARLAAYGIS MEDLRAGIAG ANVSGPKGSL DGAQQAYTIA ANDQIAVADA
YKPIIIAYRN GSPVTIGDVA QIVDGLENDR TGGWYNGTPA VIIDIQRQPG ANVIEVVRQI
REEIPKVQRA IPAGVKLTVV SDRTVTIRAS VHDVQFTLIL SVVLVTLVVL LFLRSLRATL
IAGVALPLSL ITSFGIMYFA GFSLDNLSLM ALTIGTGFVV DDAIVMIENI VRHIENGESV
MEASLRGASE IGFTVISLTV SLIAVFIPLL FMSGLVGRMF REFALTLTIA VVTSAIVSLT
LTPMMCSRLL KHSGGERAVP GMAAVSRSID RMVEFYHRTL LWVLRHQRAT LVVVFATVAA
TMVLYVVAPK GFLPLQDTAS ITAVTEAGPD VSFAEMRKHQ AEVANVIKED PDVTGVVSVI
GAGSVNPTTN VGRLVMTLKP RSDRRDDVAV VIARLKERVA PIPGMTVYFQ PVQDVQISTQ
SSRSLYQYTL TGTDAAQVSE WARKLVAELR RDPLFQDVSS EAQENGLRAA LHIDRARAGQ
LGVSLQGVND TLNDAFAQRQ ISTVYGQANQ YRVVLEALPQ YQRDPSILSK LYLPGLAGAQ
VPLSAVATLT RTTAPLSISH HAQFPATSLS FNLAPGESLG DAVERVKTIE THIGMPSSIV
GVFSGDAAEF SKSLAGQPWL ILAALVTIYI VLGVLYESYI HPITILSTLP SAGVGAILAL
MLFGQDLSVI GLIGIILLMG IVKKNAIMMI DFALEAERHQ GMSPTEAIVQ ACLLRFRPIM
MTTLAALFGA LPLAIESGTG AELRFPLGIS IIGGLLLSQL LTLYTTPVIY LALDRLNKRI
EKAVPTGGPE QPPIAGTTEG MQ
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