| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2055 |
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| Symbol | |
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| ID | 4031475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2280230 |
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| End bp | 2282329 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637970512 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_577313 |
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| Protein GI | 92117584 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.396596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCCTG CACTGCTCAA TCCTCTCTTT GCATCGGTGA CCAGCCTGTC CGGCGTCGGC
CCGAGACAGG ACAAGCTGTT CCGGTATCTG CTCGGGCGCG ACGAAACCCC GCGCCTGATC
GATCTGCTGT TTCACCTGCC TGGAAGCGTC ATCGATCGCA GGGCGCGACC CAAGGTCCGC
GATGCCGTTC CCGGCACCGT CGTGACACTG GAGGTGACCG TCGACCGGCA TCGCCCTACG
CCGTCCGGAC GCTCGCGCGC GCCGCATCTG GTCTATGCCA GCGACGAGAC CGGGGACGTC
GTGCTGACCT ACTTCCGCGC CCAGCCGGGC TACGTCGAAA AGTTGCTTCC CGTCGGAACC
AAGCGCTACG TGTCCGGCAC CGCGCAGATA TTCGACGGTA GCTTGCAGAT CGTGCACCCC
GACCGGGTGG TCGATGAGGC CGGGTTTGCA AAACTTTCGG GCATCGATCC CGTCTATCCC
CTCACCGAGG GGCTGGCGCT GGGCTCCTTG CGGCGCGCGA TCGCGATGGC CCTGCAAAGG
CTCCCCCTAT TGCCCGAATG GATCGGTCCG GACATTTTGC GCCGGTGCAG CTTCCCGCCG
CTGGAAGAAG CGCTCCATCG CGTTCACGTC CCGCTGGAAT TGACCGACAT TCTCCCGGAA
AGCCGGTTCT GGTCACGCCT TGCCTTCGAC GAGCTGCTTG CCGGACAACT CGCGCTGGCA
CTGGTGCGCG CGCAGCTTCG CCGGCCGGCT GGAAGCCGAC ACGCCGGCGA CGGGCACCTG
CGCAACAGGA TTATCGACGC GCTTCCCTAC GCCCTGACCG CATCTCAACA GCAGGCCGCT
GCCGCGATCA GCGATGATTT GCGGCAGCCG GTGCGGATGC TGAGGTTGCT TCAGGGCGAT
GTCGGCTCGG GCAAGACGGT CGTCGCGCTG CTCGCCGCCG CCGCGGTGAC TGAGGCCGGC
AAGCAGACGG CCCTGATGGC GCCGACCGAA ATCCTTGCCC GCCAGCATAT CAAGACCGTC
GCACCGCTGG CCGACCGGGC CGGCCTGCGT GTTGCGATCC TGACCGGCCG CGAGAAAGGC
AAGGAACGGC GCGAGATCGT TGCACGCCTG GCCAACGGCG ACATCGACTT GCTGGTCGGA
ACCCACGCAT TGATCCAGGA CGATGTGGCG TTCAAGGCGC TGGCGCTTGC GGTGGTGGAC
GAACAGCACC GTTTCGGGGT GCGTGAGCGC CTCGCCCTGA CCGCCAAGGG CGAGGCCGTG
GATGTGCTGG TCCTGAGCGC AACACCGATC CCGCGCACGC TCGTTCTCAC CTATTTCGGC
GACATGGACG TCTCCGAATT GCGCGAAAAG CCCGCTGGTC GGCAGCCGAT CGATACCCGC
GCCCTCCCCG ACAGCCGCCT GAACGAGGTG ATCGAAGCGG TCGGCCGCGC CGTGAAGGCC
GGCAAGCTGG TTTACTGGAT CTGCCCGCTG GTCGAGGAAT CCGACACCGT CGACCTGACC
GATGCTGAGC AGCGCTTCGA CAGCCTCAAG GCCCGCTTCG GCGACAAGGT CGGCCTTGTT
CACGGCAAAA TGCGAGGCCT GGAGAAAGAT CGCGTGATGG CGCAATTCGC GGCGGCCGAA
ATCAATCTGC TGGTGGCGAC AACCGTCGTC GAGGTCGGCG TTGACGTGCC GGCGGCGACC
GTCATGGTCA TCGAGAACGC GGAACGCTTT GGCCTTGCGC AACTGCATCA ATTGCGGGGC
CGGATCGGCC GCGGCTCGGA GCCATCGACC TGCCTGCTGC TTTACCGGGA ACCGCTGGGC
GAGGTGTCAG CCGCACGGCT GCGGGTGATC CGGGAAACCG CGGATGGCTT CCGTATCGCC
GAAGAAGATC TGAAGCTGCG CGGCGAAGGC GACGTGCTCG GGACCCGTCA AAGCGGCCTG
CCCGGCTATC GCATTGCGCG CTCCGATGTT CATGCCCAAC TCATCACGCA GGCTCGCGAC
GAAGCCTTGC GTATCATGAA GCAGAATCCG AAGCTCACGG GCGCGCACGG CGAAGCTTTG
CGATGCCTGC TGTATCTGTT TGAGCGCGAC GAAGCGCTGC CCCTGATCGG TGCGGGCTGA
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| Protein sequence | MRPALLNPLF ASVTSLSGVG PRQDKLFRYL LGRDETPRLI DLLFHLPGSV IDRRARPKVR
DAVPGTVVTL EVTVDRHRPT PSGRSRAPHL VYASDETGDV VLTYFRAQPG YVEKLLPVGT
KRYVSGTAQI FDGSLQIVHP DRVVDEAGFA KLSGIDPVYP LTEGLALGSL RRAIAMALQR
LPLLPEWIGP DILRRCSFPP LEEALHRVHV PLELTDILPE SRFWSRLAFD ELLAGQLALA
LVRAQLRRPA GSRHAGDGHL RNRIIDALPY ALTASQQQAA AAISDDLRQP VRMLRLLQGD
VGSGKTVVAL LAAAAVTEAG KQTALMAPTE ILARQHIKTV APLADRAGLR VAILTGREKG
KERREIVARL ANGDIDLLVG THALIQDDVA FKALALAVVD EQHRFGVRER LALTAKGEAV
DVLVLSATPI PRTLVLTYFG DMDVSELREK PAGRQPIDTR ALPDSRLNEV IEAVGRAVKA
GKLVYWICPL VEESDTVDLT DAEQRFDSLK ARFGDKVGLV HGKMRGLEKD RVMAQFAAAE
INLLVATTVV EVGVDVPAAT VMVIENAERF GLAQLHQLRG RIGRGSEPST CLLLYREPLG
EVSAARLRVI RETADGFRIA EEDLKLRGEG DVLGTRQSGL PGYRIARSDV HAQLITQARD
EALRIMKQNP KLTGAHGEAL RCLLYLFERD EALPLIGAG
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