Gene Nham_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2049 
Symbol 
ID4031469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2270581 
End bp2271333 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content64% 
IMG OID637970506 
Productinvasion associated locus B 
Protein accessionYP_577307 
Protein GI92117578 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.49734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTC GTCTCTTGGC CGCGTCGGCT CTTCCGCGCG GACGGGCCTT TGCCCTGTTT 
GCCGCGGTGA CGCTCGTGGC TGCTCCATTT ATGTCGGACG CTCTCGCCCA ACACCCGCCC
GCCGCGGCGT CCAAGGGCAA GAAAGCCGCG AGCCCGAATG CTGCACAGGC GCCCGCGGCC
CCGGCGGCAG CGCCGGCCGA CCAGCAGGTG CAACTGATCT ATGCGCCCTG GACCAAGTTT
TGCCTGAAGG GGCAGGATGC GAAGGCCAAG CAGGTCTGCT TCACCGGCAA GGACGGACGG
ATCGAATCCG GCCAGCCTGT GATCGCAGCG GTCATCATCG AGCCGGAAGG CGAGCCGAAG
AAGATCCTCC GCGTGACACT GCCGCTCGGC ATGCAGCTTG TCCACGGAAC GCGCATCATC
ATCGACAACA ATCCGCCGCA GCAGAGCCCT TACGTGATCT GCTTCGCCAA CGGCTGCATG
TCGGATTACG AACTGACGGC GGAGATGCTT GCGAACCTCA AGAAAGGTCA GAACCTGATC
GTTCAGGCGA TCAATTCCAA CGGCGCGCCA CTGACGCTGC CGCTTCCGCT GGCTGAATTC
GCCAAGGCTT ATGACGGCCC GCCGACCGAT CCGAAGGTGT TCGAGGAGAC TCAGAAGAAG
CTGCAGGAAG AGCTGCAAAA GCGGGCCGCC GAAGCGCGCG CGAAGCTCGA AGCCACCCAG
CAGAATGCGG GCACACCGGC CGCCAAGCAG TAG
 
Protein sequence
MNVRLLAASA LPRGRAFALF AAVTLVAAPF MSDALAQHPP AAASKGKKAA SPNAAQAPAA 
PAAAPADQQV QLIYAPWTKF CLKGQDAKAK QVCFTGKDGR IESGQPVIAA VIIEPEGEPK
KILRVTLPLG MQLVHGTRII IDNNPPQQSP YVICFANGCM SDYELTAEML ANLKKGQNLI
VQAINSNGAP LTLPLPLAEF AKAYDGPPTD PKVFEETQKK LQEELQKRAA EARAKLEATQ
QNAGTPAAKQ