Gene Nham_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2048 
Symbol 
ID4031468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2270163 
End bp2270495 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content56% 
IMG OID637970505 
Producthemimethylated DNA-binding region 
Protein accessionYP_577306 
Protein GI92117577 
COG category[S] Function unknown 
COG ID[COG3785] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02097] hemimethylated DNA binding domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.257599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG CGCGTATCGC CAGATTTCAG ATCGGCCAGA TCGTTCGCCA CCGGATTTTT 
CCGTTTCGGG GCGTGATTTT CGATATCGAT CCGGTCTTCA ACAACACGGA AGAATGGTGG
CTCTCGATCC CGGAGAATGT CCGGCCGCAC AAAGACCAGC CATTTTACCA TCTGCTCGCC
GAGAGCGCGG ATTCCGAATA CGTGGCTTAT GTGTCCGAGC AGAACCTTCT GCCCGATGAC
ACCAGCGAGC CGATCCGGCA TTCGCAGGTG ACGGAGATTT TCGTCAAGGA CAAATCCGGC
GGCTATCGCC CCCGCAATCC GTCGCTGAAC TGA
 
Protein sequence
MAKARIARFQ IGQIVRHRIF PFRGVIFDID PVFNNTEEWW LSIPENVRPH KDQPFYHLLA 
ESADSEYVAY VSEQNLLPDD TSEPIRHSQV TEIFVKDKSG GYRPRNPSLN