| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2042 |
|---|
| Symbol | |
|---|
| ID | 4029305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 2264922 |
|---|
| End bp | 2265689 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637970499 |
|---|
| Product | LamB/YcsF family protein |
|---|
| Protein accession | YP_577300 |
|---|
| Protein GI | 92117571 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG ACCTCAACTG CGATCTCGGC GAAAGCTTTG GCGTCTGGTC GATGGGCAAC
GATGCCGCGA TGATCGATCT CGCGACCTCC GTCAACATCG CCTGCGGCTT CCACGCCGGC
GATGCCGATA CCATGAAGAA GACGGTCGAT CTCGCCAAGG CGCGCGGCGT CAGCATCGGC
GCGCATCCCG GCTATCGCGA CCTGCACGGT TTCGGCCGGC GTCCGGTCGT GGGCCTTTCA
TCGTCGGAGC TTGAAAACCT CGTCGCCTAC CAGATCGGCG CATTGCAGGC GATTGCTACC
ATGGCCGGGC ACAAGGTCAC GCATGTGAAG GCGCACGGCG CGCTTTCCAA CATCGCCTGC
GACGACGACA TGACCGCGCG AGCGATCGCC TCGGCAATCA AGGCGGTCGA TCCCGATCTG
GTCTTCGTGG TGCTCGCGAA CTCGCGCCTC GTTGCCGCGG GTGAAGCCCT CGGCCTGTCG
ATGGTGCATG AAGTGTTTGC CGACCGTGCC TACGAAGATG ACGGATCGCT GGTATCGCGG
CGCAAGCCGG GAGCCGTCCT GCACGACGCG GACGCCATTG CCCAGCGCGT GGTGAAAATG
ATTCAGTCCG GAGAGGTCGT CTCGATCACC GGCAAAACGA TCAAGATGCG GATGGATACC
GTCTGCATCC ACGGTGACAC GCCCGGTGCG GTCGAAATCG CGCGTGCGTT GCGCAAGGCG
CTCAAGGACA ACGGTATCGC GGTTGCACCG TTCAAGACGG CGAAATAA
|
|---|
| Protein sequence | MTIDLNCDLG ESFGVWSMGN DAAMIDLATS VNIACGFHAG DADTMKKTVD LAKARGVSIG
AHPGYRDLHG FGRRPVVGLS SSELENLVAY QIGALQAIAT MAGHKVTHVK AHGALSNIAC
DDDMTARAIA SAIKAVDPDL VFVVLANSRL VAAGEALGLS MVHEVFADRA YEDDGSLVSR
RKPGAVLHDA DAIAQRVVKM IQSGEVVSIT GKTIKMRMDT VCIHGDTPGA VEIARALRKA
LKDNGIAVAP FKTAK
|
|---|
| |