Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2020 |
Symbol | |
ID | 4031401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2245282 |
End bp | 2246910 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637970477 |
Product | phage terminase |
Protein accession | YP_577278 |
Protein GI | 92117549 |
COG category | [R] General function prediction only |
COG ID | [COG4626] Phage terminase-like protein, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCAA AGAGTACGTT CCCCGAGTGG ATATATGACG GCTCGGAGAT CCCCGATCCA TTCGGCTACG GCGAGCGTGC CGTTACGTTT CTTCGGCGGC TGAAGCATCC GAAGTCGACG TTGCCGGGCA GGGCGTTCCA GCTTGATCCG TGGCAAGAGC GTATCGTGCG CCGCATTTAC GGCCCGCGGC ATGATGACGG GCGGCGCATC GTCAACACCG TCACCATGCT ACTGCCAAGG GGAAACCGTA AGACGAGCCT TGGCGCGGCG CTGGCTTTGC TGCACACGAT CGGCCCCGAG CGTATGCCCG GTAGCGAAGT CATTTTTTCG GCTTCGGATC GTAAGCAATC CGGCATCGCC TTCAAAGAGG CGCGCGGCAT AGTGCAGGCC GATAAGCGGC TTGTGAAAGC GACGAAGGTT TACGACGCCT TCAACAGCGC AAAGAAAATT GCCTACCCGA AGGATAGTGT CGAGCTGGAG ATTATCTCGG CCGACGCGCC ATCGTCTGAA GGCCGCACGC CTGCTTTTGT GCTCGCTGAC GAGACGCATA TCTGGCGCGG CAAGGATTTA TGGACTGTTC TGACCAACGG CCTTGATAAG ATCGATAACA GCTTGCTTGT CGTCACGACC ACCGCAGGCC GCGGCACCGA CAATATCGGT TATGAGATTA TCGACCGGGC ACGAAAGATT GCGCGCGGCG AGATCGTCGA CCCGACCGTG TTGCCGGTGT TGTTCGAGGC CGAACCGGAC TGCGATTACA CAAGCGAGGA AGTTTGGCGG CGCGTTAATC CGGGTAGTCC GCACGGCTAT CCCTCGATTG AGGGATTTCG CCGTCACGTC AAACGCGCTC AAGACAATCC GACCGAGCGC AGCAGCTTGA AGCGATACAA ACTCAACATC TGGGAAGATA GCAGTTCGTC GCCGTTCGTC GACATGCTCG TTTATGACGA GGGCGCTGGC GAGATTGATA CCGCTATCCT TGACGGCGAG CCATGTTGGC TGGGCGTTGA CCTTAGTTCT AGTATCGATC TTTCAGTCGT TATCGCGTGC TTCCGTGACG GCGACGACTA CATCGTGCAG CCGCACTTCT TTTGTCCGCA GGACAACTTG CGACAACGCC AAGAGGCAAC CGGTGCTCCC TATATCGAAT GGGCGCGCAA AGGGTTGATA ACGGCCACGC CCGGCAACGT GATCGACTTC CGGGTTGTCG AGGATCGCAT CAGGGAGCTT TGCGAGACCT ACAGCGTGCA GGAGATCGCG TGCGATCCTG CGATGGCGCG TAATCTGCTC AACAATCTCA TAGAGGATGG TCTCCCTGCG ATCGAACATC GCCAGGGCAG CTTGAGCATG ATGCCGGCAA TCGCCGAATT GCAGCGCGCG ATTATCGGTC GGAAGTTCAA GCACGGTGGT CATCCGGTGC TGCGATTCTG CTTCGCCAAT GTCGAAGCGG AGACGAATGC AGCCGGACAT ATCGTGAGAT TCACGAAACA GAAGAAATGG CTATCGATCG ATGGCGCGCA GGCCAGCGCC ATGAGCGTCA ACAGAGCATC CGCAGGCGGC AGCGCGGCGA CAACATCGCT TTATGATGAC CCGGAATGGG AAACAGCTTT GAAGGGATTC AATGCATGA
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Protein sequence | MTAKSTFPEW IYDGSEIPDP FGYGERAVTF LRRLKHPKST LPGRAFQLDP WQERIVRRIY GPRHDDGRRI VNTVTMLLPR GNRKTSLGAA LALLHTIGPE RMPGSEVIFS ASDRKQSGIA FKEARGIVQA DKRLVKATKV YDAFNSAKKI AYPKDSVELE IISADAPSSE GRTPAFVLAD ETHIWRGKDL WTVLTNGLDK IDNSLLVVTT TAGRGTDNIG YEIIDRARKI ARGEIVDPTV LPVLFEAEPD CDYTSEEVWR RVNPGSPHGY PSIEGFRRHV KRAQDNPTER SSLKRYKLNI WEDSSSSPFV DMLVYDEGAG EIDTAILDGE PCWLGVDLSS SIDLSVVIAC FRDGDDYIVQ PHFFCPQDNL RQRQEATGAP YIEWARKGLI TATPGNVIDF RVVEDRIREL CETYSVQEIA CDPAMARNLL NNLIEDGLPA IEHRQGSLSM MPAIAELQRA IIGRKFKHGG HPVLRFCFAN VEAETNAAGH IVRFTKQKKW LSIDGAQASA MSVNRASAGG SAATTSLYDD PEWETALKGF NA
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