Gene Nham_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2006 
Symbol 
ID4031559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2232212 
End bp2233015 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content61% 
IMG OID637970463 
Producthypothetical protein 
Protein accessionYP_577265 
Protein GI92117536 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0556824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTGA CGCTGACCGT CTTGGGTTGC GGATCGTCCG CCGGCGTGCC ACGTCCGGCG 
CTGGGCTGGG GCGCCTGCGA TCCGAAAAAT CCGAAGAACC GCCGCCGCCG CTGTTCGCTG
ATGGTCGAGC GCACGTCGGA GCAGGGGACC ACGCGTGTTG TGATCGACAC CTCGCCCGAC
CTGCGCGAGC AGTTGATCGA CGCCAATGTC GATCACATCG ATGCGGTGTT TCTCACCCAC
GAACACGCCG ACCAGACCCA CGGGATCGAC GATCTGCGTT CGGTCGTCTT GTATCAACAC
CGGCGGATCC CGGTGTATCT CAATCGATCC ACTGCTGCGG ATGTCATGCA GCGATTCTCG
TATTGCTTCG AATCGCCCGA AGGCAGCTTC TATCCTCCGA TCCTGGAGCA ACGCGCGATC
GAAGCTGGCG AAAGCCAAAT CATCGACGGC AAGGGCGGCG CGCTCACACT GTCGGCCTTC
CTCGTACAGC ACGGCAGCAT TCCGGCGCTG GGCTATCGGA TCGGCAACGC TGCCTATACG
CCCGATTTGC ATGATATTCC GCATGAAAGC TGGCCGGCGC TTGAAAACCT CGATCTGTGG
ATCGTCGACG GTCTGCGCTA CAAGCAACAC CCCAGCCATT TCAGCGTTGC AGATGCGTTG
TCGTGGATCG ACCGCTTCAA GCCGAAGCGC GCCGTCATTA CCAACATGCA CTCCGACCTG
GACTACGAGA CGCTGCGTCA CGAGCTGCCG GCAAATGTCG TACCCGCCTA CGACGGGATG
CGGCTGGAGA TCGATCCAGC TTGA
 
Protein sequence
MTVTLTVLGC GSSAGVPRPA LGWGACDPKN PKNRRRRCSL MVERTSEQGT TRVVIDTSPD 
LREQLIDANV DHIDAVFLTH EHADQTHGID DLRSVVLYQH RRIPVYLNRS TAADVMQRFS
YCFESPEGSF YPPILEQRAI EAGESQIIDG KGGALTLSAF LVQHGSIPAL GYRIGNAAYT
PDLHDIPHES WPALENLDLW IVDGLRYKQH PSHFSVADAL SWIDRFKPKR AVITNMHSDL
DYETLRHELP ANVVPAYDGM RLEIDPA