| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2002 |
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| Symbol | |
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| ID | 4031555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2226166 |
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| End bp | 2228406 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637970459 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_577261 |
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| Protein GI | 92117532 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.118676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCAC CAGCCTCCGC ATCGGGGCTT GAAGCCGCGT ATCACCGGCT TCATCCGAAG
ATCCGTCGTT GGATTCGTGA TCAGGGATGG GACGAGCTCC GCGAAATCCA GGCGCGGACG
ATCGTCGCCG TGCTCGAAAG CGATCGCGAT GTCCTGATCG CGGCGTCCAC CGCCGCGGGA
AAGACCGAAG CCGCTTTCCT TCCGATATTG ACGTCGATCG CCGACCGCAA GGCCTCGGGA
TTTGCCGTCC TCTACATCAG TCCGCTGAAG GCCCTCATCA ACGACCAATT CCGGCGTCTC
GAAGAGCTCT CCGAGAGTAT GGAGATCCCG GTCGTCAAAT GGCATGGCGA TGCGCCCCAG
TCCGAAAAGA AGAAGGCCAT GGCGAAGCCG GACGGCATCG CTCTGATCAC ACCGGAATCG
ATCGAGGCGA TGCTGGTCCG CCGGCCGGCG GACGCGAGGC GCCTGCTGTC TTCGGCCGAG
TTCATCGTGA TCGACGAAGT TCATGCGTTC CTGCAGGGGC CGCGTGGGCT CCACGTTGCC
AGTCTGCTCC GCCGCATCGA TGCGATGTCG GAACGGCCGG CCCGGCGGAT CGGACTGTCC
GCGACGATCG GCGACCTCGA TCAGGCGGCC GCATGGCTTC GACCGACCGA TCCGCAGCAC
GTCGAGCGAC TTAAAGCCAA ATCGGACGCA CCGGAGCTTC GCCTCCAGGT CAGGGGATAT
ATCGAGCCTC CGGATCTTGA TGACCCGGAC CACGCCGAAG GCGGTGCGGA AGGCGCAGGC
GACATGCCTC ATCGGATAGC GCTCGACTAT ATCGCAGACC ACCTGTTCGA GAAGCTGCGT
GGCGAGAACA ATCTCGTCTT CGGTGGATCG CGCCGGACTG TGGAATCCGC CGCCGATCGG
CTCCGGCTCA GGTCCGAGAA GTCGAACGTC CCCAATGAAT TCTATCCGCA TCATGGGAGC
CTTTCGAAGG TCCTGCGCGA AGAACTCGAG GAACGCCTGA AAGACGGGAA GCTCCCGACG
ACGGCGGTCT GCACGTCCAC GCTCGAACTC GGGGTCGATA TCGGCTCGGT GAAGTCGGTG
GCGCAGATAG GCGCGCCGCG GTCCCTGGCT TCGCTGAGGC AGAGGTTGGG GCGCACCGGT
AGGCGCCGAG GGACGCCGTC GGTTCTGCGG ATCTATCTGA GAGAGCCGGA AATAACGCAG
AAGTCCGGCA TCATGGACCG GCTCCGACCG AACACGATCA GGTCGGTCGC AGTGGTCCAG
CTACTGCTCA AAGAATTCGT CGAGGAGGCG GGTGCAGCTC CGGAAATCGC GTCCACACTG
ATCCATCAGG TCTTGTCGGT GATCACGGAG CGCGGTGGCA TCCGGCCGAA GCCGCTCTTC
GATCTGCTGT GCGGTCCCGG CCCATTTTCT TCGGTCGGAC CTTCTGACTT CGCGAACCTG
CTGCGGCATC TGGCGACCAA GGAGGTCAGG TTCATTGAGC AGGCTCCGGA CGGCACTCTG
ATGCTGGCGC AAGAGGGTGA GAAGACAGTC CAGTCGCGCA GCTTTTTTGC CGTTTTCGAG
TCGAGTGAAG AGTGGCGCCT GACGGTCGGG GGCCGAAGTT TGGGGACGCT GCCGATCACG
TACCCGGTCC ATAAGGACGG CCTCGTCGTG TTCGCCGGGC AGAGATGGAT CATCCATGAT
CTGGATGAGC AAACGAAGAC ATTGGTGGTT GCGCCCCATC CGGGCGGCGT CGTGCCGCGG
TTCGAACCGT CTGCCGGCGA ACCCGCCCAT GATCGCCTGA TCGCCGAGAT GCGGGCGGTC
TACCTGACAG ATGATATCCC GCCTTACCTG GACGAGAAAG CCCAGGAGTT GCTGGCCGAA
GGAAGGACGA CCTTCCGGCT ATTGCGCCTC GACCACCGCT CGCTCGTCTC CGAGGACCGC
GACATGCACG TATTCCTTTG GAAAGGATCG CAAGTGACTG CCGTTTTCAG CGCGGCCCTT
GCGATGGCGG GTCTCGCGTC CGGAGTTCAC GATCTGGGCG TGTCGGTCTC CAAGATAAAG
GAGTTGGAGT TGCGGCCTAT CTTGGCGACG CTCGCGCAGA TGCACGAATT GGACCCCGCT
GACGTCGCGG ATTTCGTTGC CAACATCAAG GTCGGAAAAT TCCGCGAGGC CGTACCAGAT
GACCTCGCGC GAGGATTGTG GGCGCAGCAG AACCGGAAGG CGATTTTGGC GGTCGCGCCA
TGTGCAGGCC TTCTAGCGTG A
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| Protein sequence | MSSPASASGL EAAYHRLHPK IRRWIRDQGW DELREIQART IVAVLESDRD VLIAASTAAG
KTEAAFLPIL TSIADRKASG FAVLYISPLK ALINDQFRRL EELSESMEIP VVKWHGDAPQ
SEKKKAMAKP DGIALITPES IEAMLVRRPA DARRLLSSAE FIVIDEVHAF LQGPRGLHVA
SLLRRIDAMS ERPARRIGLS ATIGDLDQAA AWLRPTDPQH VERLKAKSDA PELRLQVRGY
IEPPDLDDPD HAEGGAEGAG DMPHRIALDY IADHLFEKLR GENNLVFGGS RRTVESAADR
LRLRSEKSNV PNEFYPHHGS LSKVLREELE ERLKDGKLPT TAVCTSTLEL GVDIGSVKSV
AQIGAPRSLA SLRQRLGRTG RRRGTPSVLR IYLREPEITQ KSGIMDRLRP NTIRSVAVVQ
LLLKEFVEEA GAAPEIASTL IHQVLSVITE RGGIRPKPLF DLLCGPGPFS SVGPSDFANL
LRHLATKEVR FIEQAPDGTL MLAQEGEKTV QSRSFFAVFE SSEEWRLTVG GRSLGTLPIT
YPVHKDGLVV FAGQRWIIHD LDEQTKTLVV APHPGGVVPR FEPSAGEPAH DRLIAEMRAV
YLTDDIPPYL DEKAQELLAE GRTTFRLLRL DHRSLVSEDR DMHVFLWKGS QVTAVFSAAL
AMAGLASGVH DLGVSVSKIK ELELRPILAT LAQMHELDPA DVADFVANIK VGKFREAVPD
DLARGLWAQQ NRKAILAVAP CAGLLA
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