Gene Nham_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1986 
Symbol 
ID4029363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2203536 
End bp2204819 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content58% 
IMG OID637970444 
Producthypothetical protein 
Protein accessionYP_577246 
Protein GI92117517 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA TAGTGATTTG CTGCGATGGG ACGGGGAACG AGATTAGCGA GAATATTTCG 
AATGTTCTGA AGCTCTATCG CGTGCTTCGT AAAACCGGAA AGACCCAGCC GCACCAAGTG
GTGTTCTACG ATCCGGGTGT CGGCACGCTG GCACGACCCG ATCCATGGAC CAAACTCAAG
CAGGATGCCA TCGCGGTGCT AGGGTTGGCG ACAGGTTACG GCCTCGACGA CAATGTCCTC
GCGGCCTACG AGTTTCTGAT CAATCAGTAC GAGGACGGTG ACGAGATCTA TCTCTTTGGT
TTCAGTCGCG GCGCTTACAC GGTCCGCGTC CTTGCAGGCC TCATTCACAG GATCGGGCTT
CTCTCGCCGC ATCAGCGGAA TCTCGCGGGC GCTGCGTTGA CGGCGTACAA GCAGACAGGA
TCGGCTGCCG ATCCCGTTCG GGCGGCAACG ACAGAGGAAT CCGAAGATAC GGGAGAAGAC
GGTCAGTCTG TTGCCTCGAC GAAGGACGAC CGCGCGTCGC AGTTTGCGCG GATCGTTTCA
TCGAGATGGC CGACGATGAA ATTCGTTGGG GTGTGGGACA CAGTCGCCAG CGTGATCGTC
CCGCGTCCGG ACAGGTTCTA CGCGTTCAGC CTGCAGACGC TGGCCAACAC CAGAAGAAAT
CCTAGCGTTC GCATCTTCCG CCAGGCGATG GCGATCGACG AACGACGAAG AATGTTCAGG
CTGGATGCCT GGGACGAGCC GCAGACCTTC ATGCACAATA GGTTCAGCGC GACGAACAAT
GCGGAGCCGC AGAACGCGCA GCAGGTGTGG CTTTCAGGCG TGCATGCCGA TATCGGGGGC
GGCTATCCGG AACAGGAGAG CGGTCTCTCG AAATTTCCGC TGATCTGGAT GATCGAAGAA
GCGGTGAAGC ACGGACTGGC CGTCGACTCC AGGACCGTGA ACCAGTTGGC TTGGGGAGTG
CAGAGAAAGG GAAGCCCGTT TAGCTACGTC CGACCTGATA TCATGCGTGA CCCACATGAT
TCCATGTCGA CCGTCTGGCG CCTGGTCGAG CGGTTGCCGA AGGGAGACAA ATACAAGGAA
TGGGCCACTC GAAAGTCGTT CCTCGGCCAT TACATCCCCG CCGGCGAACC GCGCTTCATA
CCGCCCGAGG CATTTGTGCA TCAATCCGTC TTGGATAGGA TGGCCGCTGT CGCAAGTTAT
CGTCCCGAGA ACTTTCCGGA AACGCCTAAG GTCGTTCCGA TGTCCGCAGG CCAAGCCGAT
GGGGCGGAAC CTGACGTATC CTAG
 
Protein sequence
MKNIVICCDG TGNEISENIS NVLKLYRVLR KTGKTQPHQV VFYDPGVGTL ARPDPWTKLK 
QDAIAVLGLA TGYGLDDNVL AAYEFLINQY EDGDEIYLFG FSRGAYTVRV LAGLIHRIGL
LSPHQRNLAG AALTAYKQTG SAADPVRAAT TEESEDTGED GQSVASTKDD RASQFARIVS
SRWPTMKFVG VWDTVASVIV PRPDRFYAFS LQTLANTRRN PSVRIFRQAM AIDERRRMFR
LDAWDEPQTF MHNRFSATNN AEPQNAQQVW LSGVHADIGG GYPEQESGLS KFPLIWMIEE
AVKHGLAVDS RTVNQLAWGV QRKGSPFSYV RPDIMRDPHD SMSTVWRLVE RLPKGDKYKE
WATRKSFLGH YIPAGEPRFI PPEAFVHQSV LDRMAAVASY RPENFPETPK VVPMSAGQAD
GAEPDVS