Gene Nham_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1969 
Symbol 
ID4033105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2182235 
End bp2182753 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID637970429 
Productnuclease (SNase-like) 
Protein accessionYP_577231 
Protein GI92117502 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAC TGCTCCTAGC CGCCCTCGCA TCGATGCTGG CCACGACCGC TCTCGCCCAA 
AGCCTGACTG GGCAGGCATC CGTCATAGAC GGCGACACGC TCGAAATTCA CGGACAGCGA
ATCCGCCTGT CAGGCATCGA CGCGCCCGAA TCATCCCAAC TCTGTCGCGG TGACGACAGC
CTGCAATATC GATGTGGGGC CAAATCAGCC AACGAACTTG ACGAGCATAT CGCGGGCAGG
CCGGTAAGCT GCGAAGGCGT CGGCAGGGAT CAATATGGGA GAGTTGTGGC GGTTTGTTCG
ATTGATGGCG AAGACGTTGG GGAATGGCTT GTGCGGGGAG GGCTCGCGTT CGATTGGCCT
AGGTATTCGC GTGGCAAGTA TGCAGGCGCT CAGAAAGAAG CGGAGCGGGC AGGGCGTGGG
GTATGGGCGG GATCGTACGT TGTGCCCCGG GCCTATCGGG CGTGCAGACG TGACGGTGGG
CGGCCTAGCG GCTGTTCGGA TGATGCGAAC GCTCGATAA
 
Protein sequence
MARLLLAALA SMLATTALAQ SLTGQASVID GDTLEIHGQR IRLSGIDAPE SSQLCRGDDS 
LQYRCGAKSA NELDEHIAGR PVSCEGVGRD QYGRVVAVCS IDGEDVGEWL VRGGLAFDWP
RYSRGKYAGA QKEAERAGRG VWAGSYVVPR AYRACRRDGG RPSGCSDDAN AR