Gene Nham_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1948 
Symbol 
ID4030551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2164015 
End bp2164854 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content56% 
IMG OID637970410 
Producthypothetical protein 
Protein accessionYP_577212 
Protein GI92117483 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATAA AAGACGTTCT TCTCACTTTG ACGAGCTATC CCGAACCGAC TCCGGTTTCG 
GTTATTGAGG ATGCAGTTTC GTTTGCCTCG TCGCTGGGCG CACACATTGC GGCGATCGCC
TGCGAGGCAC GTGTAGAGAT TCCTGGAACC TTCCTCTCCA GCTCGCTTGT GGACGTCGCG
GGAATTGTCG CCAGCGAGGC GCGTAAGAGC CTGAAGAACG CCCAGGATTT ACTCACTTCA
TTTGAGTCGG CGGCCGAGAG GGCAGGCCTG CTCCACGAAA AGATCTTGGA GCGGTGTGTC
ACATACAAGG TGTCGGACAC ATTCGTGGAA TACTCACGCC TTCGCGATCT CACGATCATC
TCGGTGCCCG ACTCCTATAA CCAATGGTAT GCGGAAGCGG TGATTTTTGG ATCTGGAAAA
CCGACCCTGG TTTTGCCGGA ACGGCACCGC ACGAACTGGT TCGAACTCAA GACAGTTGTG
GTAGCGTGGG ATTTTAGTCG TACGGCGGCC CGGGCGATTG CTGATGCCAT GCCTGTATTG
GAAAAAGCAC AGCAGGTGCG GGTTGTGACC GTTTTTAACG AGAAGGCTTT GGGCGCGAGG
AATTCGGCGG AGGAAGTCGC GAAAAACATT TCACGGCATG GCGTCTATGT GACGCTTGAT
GAGGTTGGCG CCGCGGCCCG GACGATCGGC GAGGTTCTCG AGAGCCATGC CGCTTCATGC
GGCGCCGACG CACTTGTGAT GGGTGCGTAC GGTCACTCCA GACTCCGGGA GTTCATTCTC
GGCGGTGCTA CAAGAAGCTT GTTGGCCAGT CCACCCCTTC CGATTCTGTT TTCCCACTGA
 
Protein sequence
MAIKDVLLTL TSYPEPTPVS VIEDAVSFAS SLGAHIAAIA CEARVEIPGT FLSSSLVDVA 
GIVASEARKS LKNAQDLLTS FESAAERAGL LHEKILERCV TYKVSDTFVE YSRLRDLTII
SVPDSYNQWY AEAVIFGSGK PTLVLPERHR TNWFELKTVV VAWDFSRTAA RAIADAMPVL
EKAQQVRVVT VFNEKALGAR NSAEEVAKNI SRHGVYVTLD EVGAAARTIG EVLESHAASC
GADALVMGAY GHSRLREFIL GGATRSLLAS PPLPILFSH