| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1947 |
|---|
| Symbol | |
|---|
| ID | 4030550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2162482 |
|---|
| End bp | 2163162 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637970409 |
|---|
| Product | signal-transduction protein |
|---|
| Protein accession | YP_577211 |
|---|
| Protein GI | 92117482 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.489577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCAC ATCAGATCAT GACCCGCAAG GTGACAACGG TGACAGCCGA CACGTCTATT
CTGGATGCTG CAAACCTCAT GTTGCAACAG CGTATCAGCG GTCTTCCGGT GGTTGACGAG
ACGGGGCGGC TGATTGGCGT GGTCTCGGAA GGAGACTTTG TGCGACGGAG TGAGATTGGT
ACGCAACGTC CTCGTATCAG ATGGCTAGAA TTCTTGATGG GGGTTGCCGG AAATGTCGCG
CAGGACTTCG TGCGAGAGAA TGGTCGCAAG GTCTGGGAGA TTATGACACA AGACGACCTC
TGTACCACAA CCGAAGACAT GCCGCTTGCG GACCTTGTGC GTTTGATGGA ACGTCGCAAT
GTCAAGCGTC TGCCCGTGGT GCGTGGACAC ACGGTAATCG GGATTGTGAC CCGCACCGAC
CTCCTTCGTT CTGTCGCAAG CTTCGCAAGG GACGTTCCGG ACCCGACGGC AGATGATGAT
CATATTCGTG ACCGCGTGAT CGCCTCCATC GAAAAGAACG ACTGGCGACC AGCGCAATTC
GGCGTCACGG TCTGCAACGG AATTGTGCAT CTTACAGGCA TCGTCGCGGA CGCGCGTTTC
CGGCGAGCTG CGATCGTGGC GGCTGAAAAC GTCTCGGGTG TGAAGCTGGT TCACGACCAC
CTCTACCTAG TCAACGGTTA G
|
|---|
| Protein sequence | MRAHQIMTRK VTTVTADTSI LDAANLMLQQ RISGLPVVDE TGRLIGVVSE GDFVRRSEIG
TQRPRIRWLE FLMGVAGNVA QDFVRENGRK VWEIMTQDDL CTTTEDMPLA DLVRLMERRN
VKRLPVVRGH TVIGIVTRTD LLRSVASFAR DVPDPTADDD HIRDRVIASI EKNDWRPAQF
GVTVCNGIVH LTGIVADARF RRAAIVAAEN VSGVKLVHDH LYLVNG
|
|---|
| |