Gene Nham_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1941 
Symbol 
ID4030544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp2159350 
End bp2159904 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content53% 
IMG OID637970404 
Productcytochrome B561 
Protein accessionYP_577206 
Protein GI92117477 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.273152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCT GCAATTCATC GAAGGGATAC GGTGCGATAC CGCAGGCGAT CCACTGGCTT 
ACCGTCATTC TTGTGGTTGT TGCCTGGACT TTGGGTCTTT TAGGCGATGA GTTGCCCAAA 
GGAACGCAGC GTGATGCCGG GCTATTTGTT CATATATCCG CAGGACTCGC TGTTATAATT 
CTACTTGTTG TTCGGTTGGC GTGGAACTTC TTCAACCCAC CGCCATCCGC GGGGTCTACA 
ACGCTTGGCA TTTGGTTAGT TCGCGCGGGG CACGCCGCTC ACTACTTGCT CTGTGTCCTG 
CTGTTTGCAG TTCCTGTCGC CGGGATCGTG CTGCAATTTG CGCGCGGCGA CTCTATTGCA 
TTATTTGGAT TGTTCGAAAT TGCATCGCCT TGGGTTAAGG ATCGGGCGTT CTCCGGGAAT 
ATTGAAGAGG TGCACGAAGT TCTTGCTCAT ACCCTGATGA TTGTCGCAGG CTTGCATGCC 
GCCGCTGCTT TGATCCATCA TTGGATACTT CGTGATCAAA CGCTCGCAAG GATGCTTCCT 
CGTTTCGGCG AGTAG
 
Protein sequence
MLICNSSKGY GAIPQAIHWL TVILVVVAWT LGLLGDELPK GTQRDAGLFV HISAGLAVII 
LLVVRLAWNF FNPPPSAGST TLGIWLVRAG HAAHYLLCVL LFAVPVAGIV LQFARGDSIA 
LFGLFEIASP WVKDRAFSGN IEEVHEVLAH TLMIVAGLHA AAALIHHWIL RDQTLARMLP 
RFGE