Gene Nham_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1930 
Symbol 
ID4030877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2147844 
End bp2148299 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content53% 
IMG OID637970395 
Producthypothetical protein 
Protein accessionYP_577197 
Protein GI92117468 
COG category[N] Cell motility 
COG ID[COG5622] Protein required for attachment to host cells 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0895084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGAA TTCCACGTGA TGCGTTGGTA TTTGTCGGCG ACGGTCGAAA GGCGTTGTTT 
CTGCGAAATG TCGGCGATGC TTTATCCGTC AATCTCAAAA CAGAGAAAGT CTTTGAAGAC
ACAAATCCGA TGACTCGCGA GCAAGGGAGC GATCGACCGG GACGGGTCAT CGAATCCTCA
CCGCCCAATC GCAAGAGCGC TGTCGAGCAG ACTGATTGGC ATGATATCGA GGAGCATCAG
TTCGCGCGAA CGGTCGCGGC GGCTATGGAG CAGATGATCC GAACGAGCAA GGCGACGACT
CTCATCGTGG TTGCACCGCC AAAAACGTTG GGCGACTTGC GGACCGCCTT CCATCCTGAG
GTGAAGGCTT GCATTGTCGC CGAGATAAAC AAGGACCTGA CCAAGCATTC GGTCGGTGAA
ATTGAAAAGC ATCTTATGAG TGATGGTTCG ACCTGA
 
Protein sequence
MFRIPRDALV FVGDGRKALF LRNVGDALSV NLKTEKVFED TNPMTREQGS DRPGRVIESS 
PPNRKSAVEQ TDWHDIEEHQ FARTVAAAME QMIRTSKATT LIVVAPPKTL GDLRTAFHPE
VKACIVAEIN KDLTKHSVGE IEKHLMSDGS T