Gene Nham_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1915 
Symbol 
ID4030862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2128866 
End bp2130446 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content58% 
IMG OID637970381 
Producthypothetical protein 
Protein accessionYP_577183 
Protein GI92117454 
COG category[S] Function unknown 
COG ID[COG2187] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.294472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGCC CGACCACCCA GGACACGGTC ACTCAGCAGG AGGTTTTTGA CTTCCTGGCC 
GCCCCCGCGA CACATGACGA TGCCGACGTG CGCCGCATCG ACACCCACGC CGCGGTGGTC
TTTCTCGCAG GCGACAGGGC ACTGAAGGTC AAACGCGCGA TCCGGTTTCC ATTTCTCGAC
TATTCAACAC TGGCGAAACG AAAGGCGTCC TGCGACGAAG AGATCAAGAT CAACCGTCCA
TCCGCGCCGC AAATCTACCG CCGCGTTGTC GCAATCACAC AAGGCGATGA CGGTTCATTC
TGCATCGGCG GCGACGGGCT GCCGGTCGAA TATGCCGTCG AAATGAAGCG CTTCGATGAA
CGCCAGACGC TGGATCACCT CGCTCAGGCC GGCGCATTGG AGCCTGCTCT GGTCGTGGAT
CTTGCCGACA CCATCGCGGC ATCGCATCGG GTCGCACCCG CCGCCGCGGC TGACCGATGG
ATTACTTCCA TTCCATCCAT CATCGCCGAC AATACATCCG CGTTCCGGGC TTCAGGCTGC
TTACCTGTAG ACGCCATCGA TGAGCTTGAC GCAGCAAGCC AGACTGAGTT CTCGAGGATT
CGAGCGCGAT TGACGGAGCG CGGCCGATTC GGGTTCGTTC GACGTTGCCA CGGCGATCTG
CATCTCGCCA ACATCGTGCT GATCGAGCAT AAGCCGGTTC TGTTCGACGC GATCGAGTTC
GATCCTGCGA TCGCCTCAGT CGATATTCTT TACGATCTGT CGTTCACCTT GATGGATCTT
TTGCACTACG GACGCCGTCT CGAGGCCAAT ATCCTTCTCA ACAGATACCT GATCACACCA
TTTGAAGACA ATCTCGACGG AATCGCGACA CTCCCGCTGT TCATGTCGAT GCGCGCCGCC
ATTCGCGCCA ACGTCCTGCT GGCACGCCTC GGCGGATCCA ATACCGATAA AGAGAGCATA
CGACTTGCGG CCCGCTCATA TTGTGCTTTG GCACGCCAAC TGATTTCCCC TGCCTCGCCA
ACGCTTGTCG CTATTGGTGG CCTGTCCGGA ACTGGAAAGA CCGTGCTGGC TCGCGCGCTC
GCCGACGCCA TTGACCCTCC GCCGGGAGCC TTGATTTTGC GTTCAGATGT CACGCGCAAA
CAGTATTTCC AGACCCATGA GACGCAACGG TTGCCTACAA CTGCCTACCA GCCAGAGGCT
ACCTCGATCA TTTATCAAAC CCTGACCGAA CGAGCCGGAC GAATTCTCTC GCAAGGGCAC
TCCGTCATTC TCGACGCGGT CTTTGCCAAG CCGGCCGAGC GGCATTCGGT TGCCGCTATC
GCTCGCAAGC TCAACCTGCC ATTTCTCGGT TTCTTTCTCG TGAGCGACAT AACAACACGA
ATGAAACGGG TCGGACATCG CGTAAGCGAT GCTTCCGATG CCACCATCGA TCTCGTCAGA
CACCAGGAGA ACTACGACAT CGGCCCGCTT GACTGGCACA TGATCGATGC TTCCGGAACA
TCTCAGCAAA CTCTGCAACG TTGCAGGGAA ACGTTTGGCG CGACTGAAAC CGTCTTGCCA
AATCCACTGG ACCCACCATG A
 
Protein sequence
MTSPTTQDTV TQQEVFDFLA APATHDDADV RRIDTHAAVV FLAGDRALKV KRAIRFPFLD 
YSTLAKRKAS CDEEIKINRP SAPQIYRRVV AITQGDDGSF CIGGDGLPVE YAVEMKRFDE
RQTLDHLAQA GALEPALVVD LADTIAASHR VAPAAAADRW ITSIPSIIAD NTSAFRASGC
LPVDAIDELD AASQTEFSRI RARLTERGRF GFVRRCHGDL HLANIVLIEH KPVLFDAIEF
DPAIASVDIL YDLSFTLMDL LHYGRRLEAN ILLNRYLITP FEDNLDGIAT LPLFMSMRAA
IRANVLLARL GGSNTDKESI RLAARSYCAL ARQLISPASP TLVAIGGLSG TGKTVLARAL
ADAIDPPPGA LILRSDVTRK QYFQTHETQR LPTTAYQPEA TSIIYQTLTE RAGRILSQGH
SVILDAVFAK PAERHSVAAI ARKLNLPFLG FFLVSDITTR MKRVGHRVSD ASDATIDLVR
HQENYDIGPL DWHMIDASGT SQQTLQRCRE TFGATETVLP NPLDPP