Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1907 |
Symbol | |
ID | 4033045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2121908 |
End bp | 2123392 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637970373 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_577175 |
Protein GI | 92117446 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAACGCG GAATTGACAA ATCCGGTGTT GGCATCTGGG ATCTTGATCT CTCGACCCGG AAGCTGTTCT GGTCCAGCCC AACACACAGG CTTTTTGGCG TCCCGGAAAA TGCCCCGGTC AGTTACGATC TTTTCCTCTC CCTGCTCCTG CCGGAAGATC GCGCGCGCAC CGAATCGGCT ATCCAACGCT CTATCAAGAC CGGATGCAGG TTTGATATTC AGTACCGCAT CCGTGGGACA CCGGCAGGGA GTCGATGGGT TCGGGCACGA GGCGGTCTCG TCATCAACGA CGACGGAGTG CCGCGGCGCC TGAGTGGCGT GGTGCTCGAT ATCGACGATC AGAAGTTAAT CGAAGAAGCC CTGCTTGCGC GCGAAGATCA CCTGCGTTCG ATTCTCGACA CGATTCCCGA TGCGATGATT GTTATTGACG ATCACGGCAT CATACAGCAC TTCAGCACTG CAGCCGAACG TCTATTCGGC TATTCAGAAC ATGAAGCCAT TGGCCAGAAT GTCAGCATTT TGATGCCTGA ACCGGATAGC AGCCGACACG ACGGCTATTT GGCCCGCTAT CAATCCACTG GCGAACGGCA CATCATCGGC ATCGGACGGA TTGTCACCGG GAAGCGCCGA GATGGGGCCA CGTTCCCAAT GCATCTGTCC GTCGGTGAGA TGCACTCCGG TGGAAAGCGG CATTTTACCG GATTTGTTCG TGATCTTACA GAGCATCAGC GAACCCAGGC CAAACTTCAG GAACTGCACT CTGAACTGGT TCACATATCT CGCTTGAGCG CGATGGGTGA AATGGCCTCT GCGCTCGCGC ACGAATTGAA CCAGCCGCTC ACCGCGATCA GCAACTACAT GAAGGGCTCG CGCCGTCTTC TGGCGGCGAG CACCGACCCT AACATCGCGA AGATCGAAAC GGCGTTGGAT CGCGCCGCGG ATCAAGCCAT CCGCGCCGGC CAGATCATTC GACGGTTGCG CGATTTTGTC TCCCGGCGGG AGTCCGAGAA GCGCGTCGAA AGCCTGGCGA AGCTGATAGA AGAGGCCGTT GCTCTCGGCC TCGCGGGCGC CCGTGAACAA AATGTCATGC TACGGCTTGA TCTGGATGCG GAATGCGATC GCGTCCTCGT CGACCGCGTG CAGATTCAGC AAGTCTTGAT CAATCTCTTT CGGAACGCCC TGGAGGCGAT GGTGGAATCA CCAAAACGGG AAATCGCCGC CTCCAGCACG AAAGCTTCAG ACGATACGGT CGAACTGTCC ATATCGGATA CTGGCCATGG CTTCAGTGAA GCCACTACCG CAAACCTGTT CGAGACTTTC TTCACGACCA AGGAAACCGG TATGGGCGTG GGGCTCTCTA TCAGCCGATC TATCATAGAA GCCCACGGCG GCCGAATGTG GGCCGAACCG AACGATTCCG GCGGCGCCAC CTTCCGACTG ACCTTGCCTA TAGCACCGAC CGAGGATTTG CCTGATGTCG CATAA
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Protein sequence | MQRGIDKSGV GIWDLDLSTR KLFWSSPTHR LFGVPENAPV SYDLFLSLLL PEDRARTESA IQRSIKTGCR FDIQYRIRGT PAGSRWVRAR GGLVINDDGV PRRLSGVVLD IDDQKLIEEA LLAREDHLRS ILDTIPDAMI VIDDHGIIQH FSTAAERLFG YSEHEAIGQN VSILMPEPDS SRHDGYLARY QSTGERHIIG IGRIVTGKRR DGATFPMHLS VGEMHSGGKR HFTGFVRDLT EHQRTQAKLQ ELHSELVHIS RLSAMGEMAS ALAHELNQPL TAISNYMKGS RRLLAASTDP NIAKIETALD RAADQAIRAG QIIRRLRDFV SRRESEKRVE SLAKLIEEAV ALGLAGAREQ NVMLRLDLDA ECDRVLVDRV QIQQVLINLF RNALEAMVES PKREIAASST KASDDTVELS ISDTGHGFSE ATTANLFETF FTTKETGMGV GLSISRSIIE AHGGRMWAEP NDSGGATFRL TLPIAPTEDL PDVA
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