| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1907 |
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| Symbol | |
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| ID | 4033045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2121908 |
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| End bp | 2123392 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637970373 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_577175 |
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| Protein GI | 92117446 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAACGCG GAATTGACAA ATCCGGTGTT GGCATCTGGG ATCTTGATCT CTCGACCCGG
AAGCTGTTCT GGTCCAGCCC AACACACAGG CTTTTTGGCG TCCCGGAAAA TGCCCCGGTC
AGTTACGATC TTTTCCTCTC CCTGCTCCTG CCGGAAGATC GCGCGCGCAC CGAATCGGCT
ATCCAACGCT CTATCAAGAC CGGATGCAGG TTTGATATTC AGTACCGCAT CCGTGGGACA
CCGGCAGGGA GTCGATGGGT TCGGGCACGA GGCGGTCTCG TCATCAACGA CGACGGAGTG
CCGCGGCGCC TGAGTGGCGT GGTGCTCGAT ATCGACGATC AGAAGTTAAT CGAAGAAGCC
CTGCTTGCGC GCGAAGATCA CCTGCGTTCG ATTCTCGACA CGATTCCCGA TGCGATGATT
GTTATTGACG ATCACGGCAT CATACAGCAC TTCAGCACTG CAGCCGAACG TCTATTCGGC
TATTCAGAAC ATGAAGCCAT TGGCCAGAAT GTCAGCATTT TGATGCCTGA ACCGGATAGC
AGCCGACACG ACGGCTATTT GGCCCGCTAT CAATCCACTG GCGAACGGCA CATCATCGGC
ATCGGACGGA TTGTCACCGG GAAGCGCCGA GATGGGGCCA CGTTCCCAAT GCATCTGTCC
GTCGGTGAGA TGCACTCCGG TGGAAAGCGG CATTTTACCG GATTTGTTCG TGATCTTACA
GAGCATCAGC GAACCCAGGC CAAACTTCAG GAACTGCACT CTGAACTGGT TCACATATCT
CGCTTGAGCG CGATGGGTGA AATGGCCTCT GCGCTCGCGC ACGAATTGAA CCAGCCGCTC
ACCGCGATCA GCAACTACAT GAAGGGCTCG CGCCGTCTTC TGGCGGCGAG CACCGACCCT
AACATCGCGA AGATCGAAAC GGCGTTGGAT CGCGCCGCGG ATCAAGCCAT CCGCGCCGGC
CAGATCATTC GACGGTTGCG CGATTTTGTC TCCCGGCGGG AGTCCGAGAA GCGCGTCGAA
AGCCTGGCGA AGCTGATAGA AGAGGCCGTT GCTCTCGGCC TCGCGGGCGC CCGTGAACAA
AATGTCATGC TACGGCTTGA TCTGGATGCG GAATGCGATC GCGTCCTCGT CGACCGCGTG
CAGATTCAGC AAGTCTTGAT CAATCTCTTT CGGAACGCCC TGGAGGCGAT GGTGGAATCA
CCAAAACGGG AAATCGCCGC CTCCAGCACG AAAGCTTCAG ACGATACGGT CGAACTGTCC
ATATCGGATA CTGGCCATGG CTTCAGTGAA GCCACTACCG CAAACCTGTT CGAGACTTTC
TTCACGACCA AGGAAACCGG TATGGGCGTG GGGCTCTCTA TCAGCCGATC TATCATAGAA
GCCCACGGCG GCCGAATGTG GGCCGAACCG AACGATTCCG GCGGCGCCAC CTTCCGACTG
ACCTTGCCTA TAGCACCGAC CGAGGATTTG CCTGATGTCG CATAA
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| Protein sequence | MQRGIDKSGV GIWDLDLSTR KLFWSSPTHR LFGVPENAPV SYDLFLSLLL PEDRARTESA
IQRSIKTGCR FDIQYRIRGT PAGSRWVRAR GGLVINDDGV PRRLSGVVLD IDDQKLIEEA
LLAREDHLRS ILDTIPDAMI VIDDHGIIQH FSTAAERLFG YSEHEAIGQN VSILMPEPDS
SRHDGYLARY QSTGERHIIG IGRIVTGKRR DGATFPMHLS VGEMHSGGKR HFTGFVRDLT
EHQRTQAKLQ ELHSELVHIS RLSAMGEMAS ALAHELNQPL TAISNYMKGS RRLLAASTDP
NIAKIETALD RAADQAIRAG QIIRRLRDFV SRRESEKRVE SLAKLIEEAV ALGLAGAREQ
NVMLRLDLDA ECDRVLVDRV QIQQVLINLF RNALEAMVES PKREIAASST KASDDTVELS
ISDTGHGFSE ATTANLFETF FTTKETGMGV GLSISRSIIE AHGGRMWAEP NDSGGATFRL
TLPIAPTEDL PDVA
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