| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1898 |
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| Symbol | |
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| ID | 4033036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2112663 |
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| End bp | 2114261 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637970364 |
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| Product | RNA-metabolising metallo-beta-lactamase |
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| Protein accession | YP_577166 |
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| Protein GI | 92117437 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCA CCATTCAATT CTGCGGTGCG GCACGCACAG TTACGGGTTC TTGTTATCAC
TTCAAGACTC CGACCGGCAG CTTTTTGGTC GACTGCGGGC TTTTTCAGGG ACAGAAGACG
CTCAAGGAGC TGAACTATAC CGCCTTTCCA TTTCGCCCGG CTGATATCGA TGTTGTCCTT
CTGACTCACG CCCACATCGA TCACAGTGGA CTGCTGCCCA AACTGGTGCG TGAAGGTTTT
CGCGGCCGGA TACTGGCGAC GCGCGGAACG ATCGATCTTT GTTCGTATAT GTTGCCGGAT
TCCGGAAACA TTCAGGAGTC CGAAGTCTTC GCTCTGAACC AGCGTAACGT AAAACGCGGG
AAATCCGAGG TCAGTCCGAT CTACACGCAG GCCGACACCA TTGCGTCACT GCAGGCGTTC
CAGGCCGTTG AGTACGAGGC ATGGACCGAT GTCATACCAG CCGTACGCGC TCGTTATTGG
AATGCCGGCC ATCTTCTCGG ATCTGCCTCG ATCGAACTGG AGTTTGCTGA AGAAAGTACA
TCTTCTCACC CGCTGCGACT GCTCGCGTCC GGCGACGTCG GCCCCGATAT GAAGTTGCTG
CAACCCAATC CTGTGGCCCC AGCGGGATTC GACTATGTCA TTTCGGAATC GACCTATGGC
GATCGTATTC GCCCGGAAAC GACACGACAA AGTCGCCAGC GATGCCTGAC CGCCGAGGTC
CGCGAAGCCG CCGCAGCAAA AGGCGCCTTG CTGATCCCCG CTTTCGCCGT CGAACGCACG
CAGGAGCTCA TCATCGACTT GGTTGATCTA ATGGAACGCG GCGAAATACC TACCTCACCG
ATCTTCCTCG ATTCTCCTCT CGCGATTCGC GCAACAGAAG TCTTCCGAAA GCATGCTGCA
AGCCTTGATC CGAGCATTGA TGTGGTTCGC TTGCTCAATT CACCTCATCT CAGGTTCACC
GAGACGGTGG AAGAAAGCAA GTCGATCGCA AAGCTCTCCG GCTTTCACAT CATTATAGCA
GCGAGCGGGA TGTGTGACGC CGGCCGTATC CGCCACCATC TCAAGCATTG GCTCTGGAAT
AGTAGAGCCA CGGTGCTTCT GGTCGGCTTC CAGGCCTGCG GCACGCTGGG GCGATTCCTC
GAGGAGGGAG CCAAAGCCGT CCGCATCCAG GGTGAGGAGA TCAAGGTGTC GGCGCGGATT
CGTCGGATCG ACGATTATTC AGGACATGCG GACGGATCCG AACTGGCCCG ATGGATCGCA
GCGCGCCGCC CCATCCGGAG GGGTATATTC CTGGTCCATG GTGAAGAGCC GGCCATTACA
GGACTGTCAG AACAGATTGC AGATCGGATT GTACCATCCG CAAAAATTTT TCTTCCTCTT
CTCGATGACA TTTATGATTT ATCGACAAAT GTGCCGACGA ACCTCAACGC GGCGAACCGC
CGTCGGCTAA CACCCGAGGC TGTTGTCGCA CTCGATTGGC ACAACGATAT GTCCAAACTC
ATACTCGACA TCAACGAGAG GGTTGCAGCG GCCGCAGACG ATCGTGCACG AAACGTCGTC
ATCAGAAGAT TGAGACGAGC ACTGGACCCC GAACACTGA
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| Protein sequence | MSVTIQFCGA ARTVTGSCYH FKTPTGSFLV DCGLFQGQKT LKELNYTAFP FRPADIDVVL
LTHAHIDHSG LLPKLVREGF RGRILATRGT IDLCSYMLPD SGNIQESEVF ALNQRNVKRG
KSEVSPIYTQ ADTIASLQAF QAVEYEAWTD VIPAVRARYW NAGHLLGSAS IELEFAEEST
SSHPLRLLAS GDVGPDMKLL QPNPVAPAGF DYVISESTYG DRIRPETTRQ SRQRCLTAEV
REAAAAKGAL LIPAFAVERT QELIIDLVDL MERGEIPTSP IFLDSPLAIR ATEVFRKHAA
SLDPSIDVVR LLNSPHLRFT ETVEESKSIA KLSGFHIIIA ASGMCDAGRI RHHLKHWLWN
SRATVLLVGF QACGTLGRFL EEGAKAVRIQ GEEIKVSARI RRIDDYSGHA DGSELARWIA
ARRPIRRGIF LVHGEEPAIT GLSEQIADRI VPSAKIFLPL LDDIYDLSTN VPTNLNAANR
RRLTPEAVVA LDWHNDMSKL ILDINERVAA AADDRARNVV IRRLRRALDP EH
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