| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1889 |
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| Symbol | |
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| ID | 4029593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2100661 |
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| End bp | 2103900 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637970357 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_577159 |
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| Protein GI | 92117430 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.921811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGC GCATCGTCGA TTTCTCGGTC AGGCGCCGAT GGCTGGTTCT GCTGATCGCT
TTGGTTGCTG CGGCCACCGG ACTCTGGTCG CTGACCAGGT TGCCGATCGA CGCCGTCCCC
GACGTGACCA ATGTCCAGGT ACAGGTCAAC GCAACGGCGG CGGCGTTGAC ACCGGTCGAG
ATCGAGAAGC AGGTCACGGT CACGCTGGAA ACCGCGCTGG CCGGCATACC CGGCCTGGAG
TCGACACGCT CCTTCTCGCG GAACGGCTTC GCGCAGGTGA CCGTCGTGTT CGTCGACGGC
ACGAACATCT ACTTCGCGCG GCAACTCGTC GCCGAGCGCA TCAACGACGC CAAATCCTCG
CTACCTCCGG GCGTGGAGGT GAAGATGGGG CCGGTCTCGA CCGGTCTCGG CGAAATCTAC
TGGTGGGCCG TCGAATACGA AAAGCCCGGC GCTATTGCGC CCGTCCGCGA CGGCCAGCCC
GGCTGGCAGA GCGACGGCAG CTATCTGACG CCGGAGGGCG AGAGATTGAC CGACGACTTC
CGCCGGACGG TCTACCTCAG GACGGTACAG GATTGGATCG TCCGGCCGCA GATGAAGACG
GTGCCCGGCG TGGCCGGCGC CGACGCGATC GGCGGTTTCG TCAAGCAGTA TCAAGTGCAG
CCGGATCCCG CGAAGCTCGT CGGCTACGGC CTCTCCTTGA AGCAAGTCAT CGAGGCGATC
GAAGCCAACA ACGCCAGCCG AGGCGCCAAC TACATCGAGC AGAACGGCGA GGGCTACGTG
GTCCGCGCCG CCGGGCGCGT CGAGAACGTG GAGGACATCG GACAGATCGT GGTCTCGACC
CGGAATGGGG TGCCCGTACG GATCAGGGAC GTCGCCGATG TCACCATCGG GAGGGAGTTG
AGATCCGGAA GCGCCAGCGT AAATGGACGC GAGGTCGTGC TCGGAATAGC CCTGATGCTG
ATCGGCGGAA ACAGCCGCAC CGTCGCTGCC GCGGCGGACG CCAAGATCAA AGAGATCACC
AAGATGCTAC CGCCGGGCAT CCACGCCCGA ACGGTGCTCA ACCGCACGCA ACTCGTCGAC
GCCACGATCC ACACCGTCGC GACCAACCTG GCCGAAGGCG CGCTGCTGGT AATCGCCGTG
CTGTTCCTGC TGCTCGGCAA CTTCCGGGCG GCCTTGATCA CGGCCTGCGT CATTCCGATC
ACGATGTTGC TGACCGCGAC GGGCATGCTG CGGGGGCACA TCAGCGCGAA CCTGATGAGC
CTCGGCGCGC TTGACTTCGG CCTGATCGTC GACGGCGCGG TGATCATTTG CGAGAACAGC
CTTAGACACC TCGCCGAGCG GCAGGTTGCT CTCAGACGGG CGCTTTCGCG CGACGAACGC
CTCAAGACGA TCACCGCGTC CGCGGTCGAG ATGATCCGGC CGACCGTCTA TGGCCAGCTC
ATCATCATCC TCGTCTACGT CCCGCTGCTC ACCTTCTCCG GCGTGGAAGG CAAGACGTTC
GAGCCGATGG CGCTGACGGT GATGATCGCG CTGGCCACGG CCTTCGTGGT CTCCCTGACC
TTCGTCCCAG CCGCGACAGC GATCGTCCTG ACGAGGCCCG TGAGGGAGAG CGAGAACTTC
CTGGTCCGCC GGCTGAAGGA TGCCTACGCG CCGATCCTGT CCCGAAGCAT CACGAAACCC
GGCTTGGTCA TCACAGCGGC GGCTGCGCTC TTCGCCGCCT CGCTCGTCCT GTTCTCCCGC
CTGGGGCAGG AGCTCACGCC GACGTTGGAC GAGAAAAACA TCGTCATGGA AGTGAAGCGC
GTACCGAGCA CCGCACTGGC GCAGGCTCAG GCCATGCAGC TGGAGATCGA GAAGGTGATC
AGCAAATTCC CTCAGGTCGC GTTCGTGTTC TCGCGAACCG GCACGCCGGA CCTGGCGGCC
GATCCGATGC CGCCCAGCGC GTCGGACACC TACATCATCG TCAAGCCGCA ACGGGACTGG
CCCGATCCCT CGATGACGAA GGATGATCTC ATCCAAGCGA TCGAGTCGGA AGCGACCAAG
CTCCCCGGCA ACAAGGTCGG CTTCTCGCAA CCGATCGAGA TGCGCTTCAA CGAACTCATC
GCCGGCGTTC GTGAGGATCT CGGCGTCAAG GTGTTCGGCG ACGACTTCTC GGAAATGCAA
CGGACGGCGG CGCGCATCGC GGACGTCCTG AGAAAGATCG ACGGCGCCGA AAGCGTGAAG
GTCGAGGAAA CCAGCGGGCT GCCGTTTTTG GAGATCCGGA TCGACAAGGC CGAGATCGCG
CGGCGAGGCC TTAATCTTGC GGACGTCCAG GACCTGATCG AGACTGCCGT CGGCGGACGC
GCGGCGGGAC TGGTGTTCGA GGGAGACCGG CGCTTCCAGA TCGTGGTCCG GCTGAACGAC
GCGCTGCGCA ACGACATCTC CGCGCTGGAA AACCTCCCGG TGCCGTTGCC GCATTCCAAT
CCGAACGCGC CGGCTTCGAC CGTGCCGCTG CGCGCAGTCG CAACGTTCGA GCAAACGGAA
GGGGCCAACC AGATCAGCCG CGAGAACGGC AAGCGGCGCG TTGTCACGAC CGCCGAGGTC
CGCGGGCGAG ACATCGGATC GCTGGTCGCT GAGGCCCAGG CGAAGGTTGC GGAAAAGCTG
AAGCTGCCGC CGGGTAGCTA CTTGGCCTGG GGCGGGCAAT TCGAAAACTT CTCAGTCGCG
CGCCAGCGGC TCGCGATTGT CGTCCCCGCA TGCTTCGCGA TGATCTTCCT GCTTCTCTTC
GGCGCTTTGG GGTCGGCGCG CGACGCACTC CTTGTGTTCA GTGCCGTGCC GCTCGCGCTG
ACCGGTGGGA TTGCCGCGCT GTGGCTGCGC GGCATGCCGT TCTCAATATC TGCCGCGGTA
GGCTTCATCG CCCTATCGGG CGTGGCCGTG CTCAACGGTC TGGTGATGTT GACCCAGATC
CGGTCGCTGA TCGACAGCGG CGTGCCGCTT GTCCAGGCAA TCTGCGACGG AGCGCTGACG
CGTTTCCGTC CCGTCGCCAT GACGGCGCTG GTGGCGTCGC TCGGCTTTGT GCCGATGGCA
CTGGCAACGG GGACAGGCGC AGAGGTGCAG AAGCCCCTTG CAACCGTCGT CATCGGCGGA
CTGCTGACCG CAACGATGCT GACGCTTGTG GTGCTGCCGG CGCTTTATGC CCGTTTCGCG
CCGCGACGCT TGGAATTGGA TAACGCGAAC GGAATTGCGA CGAGTCGCGC AGCCGAATAG
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| Protein sequence | MIARIVDFSV RRRWLVLLIA LVAAATGLWS LTRLPIDAVP DVTNVQVQVN ATAAALTPVE
IEKQVTVTLE TALAGIPGLE STRSFSRNGF AQVTVVFVDG TNIYFARQLV AERINDAKSS
LPPGVEVKMG PVSTGLGEIY WWAVEYEKPG AIAPVRDGQP GWQSDGSYLT PEGERLTDDF
RRTVYLRTVQ DWIVRPQMKT VPGVAGADAI GGFVKQYQVQ PDPAKLVGYG LSLKQVIEAI
EANNASRGAN YIEQNGEGYV VRAAGRVENV EDIGQIVVST RNGVPVRIRD VADVTIGREL
RSGSASVNGR EVVLGIALML IGGNSRTVAA AADAKIKEIT KMLPPGIHAR TVLNRTQLVD
ATIHTVATNL AEGALLVIAV LFLLLGNFRA ALITACVIPI TMLLTATGML RGHISANLMS
LGALDFGLIV DGAVIICENS LRHLAERQVA LRRALSRDER LKTITASAVE MIRPTVYGQL
IIILVYVPLL TFSGVEGKTF EPMALTVMIA LATAFVVSLT FVPAATAIVL TRPVRESENF
LVRRLKDAYA PILSRSITKP GLVITAAAAL FAASLVLFSR LGQELTPTLD EKNIVMEVKR
VPSTALAQAQ AMQLEIEKVI SKFPQVAFVF SRTGTPDLAA DPMPPSASDT YIIVKPQRDW
PDPSMTKDDL IQAIESEATK LPGNKVGFSQ PIEMRFNELI AGVREDLGVK VFGDDFSEMQ
RTAARIADVL RKIDGAESVK VEETSGLPFL EIRIDKAEIA RRGLNLADVQ DLIETAVGGR
AAGLVFEGDR RFQIVVRLND ALRNDISALE NLPVPLPHSN PNAPASTVPL RAVATFEQTE
GANQISRENG KRRVVTTAEV RGRDIGSLVA EAQAKVAEKL KLPPGSYLAW GGQFENFSVA
RQRLAIVVPA CFAMIFLLLF GALGSARDAL LVFSAVPLAL TGGIAALWLR GMPFSISAAV
GFIALSGVAV LNGLVMLTQI RSLIDSGVPL VQAICDGALT RFRPVAMTAL VASLGFVPMA
LATGTGAEVQ KPLATVVIGG LLTATMLTLV VLPALYARFA PRRLELDNAN GIATSRAAE
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