| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1859 |
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| Symbol | |
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| ID | 4029945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2071764 |
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| End bp | 2074139 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637970331 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_577133 |
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| Protein GI | 92117404 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAATG TACTCGACCC CGCCGAGGCG GATCGCCAGG TCGAATCCGA AATCTCCGCG
TACGGGGACG GCGCGCCCCT CCCTTCCATC GACTGGGTCC TGTTCGACAA CCTGACGCCG
AATCAGGTCA TCCTCATCGA CGATAAGCCA CATCAGTTCA TCAAGAAGCT CGAGGGTGCC
GGCCCGCACC TCTTCCTGAG CCACCACACC GGCGATACCG TACGCCTCGC CACGACCCGG
CTCATCGAGT TGTTCGAAAA GGGCCGATAC TACAGCCCGC AGTGGAAAGT CCCCCCCGTC
GACGAGAAGA AAACGATCGA CGAAACACGA GCGTTGATCG GGAAGGTCTA CAACACGATC
AATGCCGGAC CGCGGGCAAG AGCCGCAGTC ATCTGGCGCT ACGTCGGCGC GTTCATCAAC
AAGATGCTGA CCGCGCCCCC GGGCGAGCCC TTTTTTAGAA ACCACGATAA CGCGCAAGAG
ATCATCGAGA CCGTTGACAA GGCGATCGAC GCGGAAAATA GCACACTCCC GCAAGGCAAG
CAGATCAAGA AGCCCAAAAA GGTGACGCGC ACGATACTGC GCTGGGTCGC GAACGAATTG
AAGCACGGCA TGCAGGAGCG CACGTTCGTC CATGCGAATG CGATCAAGGC GCGCAAGGCC
AAATTGCCGA AACAGGTCTT CTCGATCATC GGCATGACGA TCCGCGAATT GGTGGAACTC
TCGGCGGAGT TTGGACCGAC TAAGATCAAG ATGCGGACAA ACCACAAGAT CGTCGAGCGC
AATGCAGAGA TTCGTCTGCA CAACAAGGAG ATCAAGAAAC GGATCGACGA GGGCGAACTC
ACCAAAGAGG CTCTCCTGCC GGAGCTTCCG GAAGTCGGAC TTTCGACCGT GCAGGTGCAG
TACAGGCGCT ACGACGCGTG GATCAGGCTC GCTAAGGAGA ATGGTGCACA AGCTGCCGAT
CTCGAGTTTG GCGGCGCGGG ACGCTTCGAA CGTCCGAAGC GCATTCTGGA CATATGCGAG
TTCGACCACC ACCAATTCGA TTTCATGGGT GTTCTGGGCG AGACGCCGTT CGGTCGAGCT
TGGTCGAAGG CCGGAATCGA CAGGTTCTGG ATATGCCTCG GCATCGATGT CTATAGCGGA
TATCCGGTGG GATTCCACCC TTCCTTTGAC CCAGGCGGAC TACATCCCGC ACTGGCTTCG
ATCGATCACG CCATCAAGGT TAAGACCTAC GTCGACAAAC GTTTCCCGAA CATCAGAGGT
TCGCTCCTGA GCTACGGCAA GCCTCGGAAG ATTAGATACG ACAATGGCAA GGAATTCGTA
TCCGAACAGA TGGCGCTGAG TTTGGCTCGG GTGAGAATCG GCTTCGAGAT GGCGGTCCCG
CACCAACCCG ACACGAAACC GTTCGTGGAG CGCTTTTTTG GGACGCTCGA GCAGGATTTC
GTTTCTTGGC TGAAGGGCTC CACGGGATCG AATCCGCAGA AGCGCGGAGC TCGTAAGCCG
TTGCTTGAGG CGTGCATCAC GATCGACGAT TTTATCATGT TGTTCCACCT CTGGCTCATC
GAGGTCTATG CCCGACGTAA GCAGAAAGAT TTGGACTGGG ACACTCCCGA GCAACGCTGG
CTTCGCGGTG CGTCTAGTCC CTCGCATCGG CCTCAGCCTC TAACGAAGGA AGAAGCCGCG
CGCTGGGATC TCATTCCCTC TCTCGAGTTC ACTTTGACGG CCGGAAAGAA CGGTATCAAG
TGGAACAACC TTGTCTATCA GTCACCGCAA CTTCAGGCGA TGCGCACGCG CTCGGGGAGC
ATGGGGAAAC GAAAGCACGA AAACACGCCC GTGACCGTTC GAATTCCGCT GGCGAACGTA
GGCCGGTGCA TCGTTGCCGA TCCCACTTCC CGTTTCCATG GCAACGAACA CCTCCCGCCG
GAATTCGACG TGGAGTCGAC GGACAAGGAA GCTCATGGGT TATCTAAGTT TCAGTGGGAA
GTCCTGTGCA AGTTCCGCAA CGCGAAGAAG CACGCGCCCA CCGAACATCC CTCGCACCAA
GTGGGTTTCA ATCACCTTCT CGAAGAAGCA TTAAAGGCGA TGGGCATGGT GCCGACCGAC
GAGAAGCCGC CCGCGAAGGC CGTGCTCTCG AAGGGTTTAT ATCCGCGCAT CGCCGGAGTC
CTAGCCCGCG GCGCCGAGGA GCATGCGCTC GCCGTGACGG AAGAATTAAT CGAGAAGACG
GGAATCTTCA AGTCCGCTTC CGAGCAGCGC AATGCGGCTC CGGCGCCGCC TCGGGCCGAT
GCCGGCCGCA TCACCGAAGC TGTCGCCGAA AGCCCGCCCC AGCGGCATAA GAAGCTCAGG
TTTGAGGTCG ATGCGCCGCT CCCCAGGGCG CAGTAG
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| Protein sequence | MLNVLDPAEA DRQVESEISA YGDGAPLPSI DWVLFDNLTP NQVILIDDKP HQFIKKLEGA
GPHLFLSHHT GDTVRLATTR LIELFEKGRY YSPQWKVPPV DEKKTIDETR ALIGKVYNTI
NAGPRARAAV IWRYVGAFIN KMLTAPPGEP FFRNHDNAQE IIETVDKAID AENSTLPQGK
QIKKPKKVTR TILRWVANEL KHGMQERTFV HANAIKARKA KLPKQVFSII GMTIRELVEL
SAEFGPTKIK MRTNHKIVER NAEIRLHNKE IKKRIDEGEL TKEALLPELP EVGLSTVQVQ
YRRYDAWIRL AKENGAQAAD LEFGGAGRFE RPKRILDICE FDHHQFDFMG VLGETPFGRA
WSKAGIDRFW ICLGIDVYSG YPVGFHPSFD PGGLHPALAS IDHAIKVKTY VDKRFPNIRG
SLLSYGKPRK IRYDNGKEFV SEQMALSLAR VRIGFEMAVP HQPDTKPFVE RFFGTLEQDF
VSWLKGSTGS NPQKRGARKP LLEACITIDD FIMLFHLWLI EVYARRKQKD LDWDTPEQRW
LRGASSPSHR PQPLTKEEAA RWDLIPSLEF TLTAGKNGIK WNNLVYQSPQ LQAMRTRSGS
MGKRKHENTP VTVRIPLANV GRCIVADPTS RFHGNEHLPP EFDVESTDKE AHGLSKFQWE
VLCKFRNAKK HAPTEHPSHQ VGFNHLLEEA LKAMGMVPTD EKPPAKAVLS KGLYPRIAGV
LARGAEEHAL AVTEELIEKT GIFKSASEQR NAAPAPPRAD AGRITEAVAE SPPQRHKKLR
FEVDAPLPRA Q
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