| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1854 |
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| Symbol | |
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| ID | 4033031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2065501 |
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| End bp | 2068683 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637970326 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_577128 |
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| Protein GI | 92117399 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.871861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGC GCCTGATCGC CTGGTCGGCT CGCAATCTGC TGCTTGTTCT GTTCGGTGCG
GGTTTCGCGG CCGCCGCTGG CATCTACGCT CTGGTCCATC TGCCGCTCGA CGCGATTCCC
GACCTCTCGG ACACGCAGGT CATCGTCTAC ACCGATTATC CCGGCCAGGC GCCGCAGGTC
GTCGAGGATC AGGTGACCTA TCCGCTCGCG ACGGCGATGC TGACGGTGCC GAAATCGAAG
GTCGTGCGCG GGTTCTCGTT TTTCGGCGTG TCGTTTGTCT ATGTGATCTT CGAGGACGGA
ACGGACATCT ACTGGGCGCG TTCGCGCGTG CTCGAATTCC TCAATAGCGC ATCCTCGCGA
TTGCCATCGG GCGTGACGCC CACCATCGGC CCGGACGCCA CTGGGGTCGG TTGGGTCTAC
CAGTACGCCG TTGTTTCCAA GGAACTTAAT CTATCGGACA CGCGGGCCAT ACAGGACTGG
AATCTGAAAT TCGCACTGGC GAAGGCCGGG GGCGTCGCCG AGGTCGCCAG CGCGGGCGGG
TTCGTACGTC AATACAATGT CGTTCTCGAC CCGCAGCGCA TGCGCGACCG CGGGATCACG
ATGCAAAAGA TGCGTGACGC GATCCGCGCC AGCAACGCCG ACGTCGGCGG CAGGACGGTC
GAGCTATCCG AGTTCGAATA CGTCGTTCGG GGCAGGGGCT ACATCAGGAA CATCAACGAT
CTCGGCGACA TCGTGCTCAA GACCGACAAC GGCACACCCG TGTTGCTGCG CGACGTCGCC
CGCGTCGAGC TCGGCCCGGA CGAACGGCGC GGCATCACGG AATTGAACGG AGAAGGCGAG
GTCACGAGCG GCATCATCCT GCAACGCTTC GGCGCCAACG CCCTCGATGT CATCAACAAC
GTCAAGAAGC GATTCCAGGA GATTGCCACC AGCCTGCCGA AGTCGGTCGA AATCGTTCCT
GTCTACGACC GGTCGACCTT GATCAATGCC GCGATCGAAA CGCTCAAGCA TACCCTGGTT
GAGGAAAGCA TCATCGTCGC ACTGGTCTGC ATCGTCTTCC TGCTGCATGT CAGGAGCGCG
ATGGTCGCCA TCCTGATGTT GCCGGTCGGC GTGCTGATAG CATTTGGCGC GATGAAGCTG
CTCGGCATCG GTTCGAATAT CATGAGCCTC GGCGGCATCG CGATCGCGAT CGGCGCTATG
GTAGACGCGG CGATCGTGAT GATCGAGAAC GCGCACAAAC GCCTGGAACG TGCCGCACCG
GGCCAGTCAC GTCTTCAAAT CCTGATAGAT GCCGCATCCG AAGTCGGGCC CGCGCTGTTC
TTCAGCCTAC TGATCATCAC CGTGTCCTTC ATGCCGATCT TCACGCTGGA ATCGCAGGAG
GGACGCCTGT TCAGCCCGCT GGCCTTCACC AAGACGTTTG CGATGGCCGC AGCCGCTCTC
CTGTCGGTTA CGCTGGTACC TGCATTGATG GTGATCTTCG TCCGCGGCCG GATCGTTCCG
GAGCACAAGA ATCCGATCAA TCGTTTTCTG ATCTGGATCT ACCGACCGGT GATTAAGGGC
GTGATGCGGG CGCGGGCGCT GGTCATCGTT CTTGCCCTTG CAATCCTCGC CGTCACCGTG
TGGCCCGCCC GGCAACTCGG GACCGAGTTC ATGCCTGACC TCAACGAGGG CACGCTGCTC
TACATGCCGA CGACCTTGCC CGGCATTTCC GTCACCAAGG CGGGTGAGCT TCTGCAAACC
CAGGACCGGA TCATCCGCTC ATTTCAGGAG GTGGCCTCGG TGTTCGGCAA GGCCGGGCGA
GCCTCCACCG CAACCGACCC GGCGCCTTCC GAAATGTTCG AGACCGTCAT CAATCTCAAG
CCGAAGGAGC AGTGGCGTCC CGGCGTCACC ATCGACAGCC TGATCGCTGA GATGGACAAG
GCGTTGCAGT TTCCGGGTGT CTCCAATGCC TGGACCATGC CGATCAAGGC TCGCATCGAC
ATGTTGTCGA CCGGAATCCG CACCCCGGTC GGCGTCAAGG TGATTGGTCC CGATCTGGTC
GGAATCGACA AGTTGGCGAA GCGAGTCGAG CGGGTTCTGA AGGCCGTGCC CGGCACCTCC
TCGGCCTATG CCGAGCGCGG CATAGGCGGT TACTATCTGG ACATCACGCC CGATCGCGCG
GCGCTCGCGC GTTACGGCAT CATGATTCAG GACGTGCAGG ACGTGATCGC CACCGCGCTC
GGCGGACAGA CGGTGACCAC GACGGTCGAG GGCCGTCAGC GCTTTAGCGT CAACATGCGA
TATCCCCGCG ACCTCCGCGA CAGTCCCCGA AAGATCGCGT CCGACGTGCT CGTGCCGATG
CCGCAGGGAG GTGCCGTGCC GCTGGGCGAG GTGGCCAGAA TTACCCTGGA TCGCGGGCCG
ACCTCGATCC GGACGGAGAA CGGGCAACTC GCGGCTTACG TCTACGTCGA CATTCGCGAT
CGCGATCTCG GCGGATACGT GGCCGACGCG CAGAAGGCGG TGCAGGCCAG CATCGCGTTT
CCGCCGGGCT ACTACGTGAT CTGGAGCGGG CAGTACGAAT ATCTCGAGCG TGCCACCGCG
CGTCTCAAGA TCGTCGTGCC GGTGACGTTG CTGATCATCT TCCTGCTGCT GTATCTGAAT
TTCCGCTCGA TCACCGAAAC CATGATCGTC ATGCTATCGC TGCCGTTCTC CTTGGTAGGT
GGCCTCTGGC TGATGTGGTG GCTCGGGTTC AACCTGTCCG TCGCCGTCGC CGTGGGGTTC
ATCGCACTTG CGGGCGTTGC CGCCGAGACC GGTGTCGTCA TGCTGATCTA TCTCAACCAG
GCTTACGCCG AAATCGAGGC CCGGCGCGCG GCGGAGGGGC GGTCGGTCAC GCGCAAGGAC
CTCTACGACG CCGTCATGGA AGGCGCAGTC GGGCGTGTCC GCCCCAAGAT GATGACCGTC
GTCGCGATTA TGGCAGGGCT GCTTCCGATC ATGTGGAGCA CCGGGATCGG ATCGGAAATC
ATGCAGAGGA TCGCGGTGCC GATGATCGGC GGCATGGTCT CGTCGACGCT GCTGACGCTG
ATCGTGATCC CGGCGATCTT CGGCCTGATC AAGGGCATTG GGCTGCGGGA TGGCAACGGT
CATCAGCCAC CTGCCCACAC CGGGAGTGTC GAACGTACGA TCGCTCCGGA ACTTGTCGAA
TGA
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| Protein sequence | MIARLIAWSA RNLLLVLFGA GFAAAAGIYA LVHLPLDAIP DLSDTQVIVY TDYPGQAPQV
VEDQVTYPLA TAMLTVPKSK VVRGFSFFGV SFVYVIFEDG TDIYWARSRV LEFLNSASSR
LPSGVTPTIG PDATGVGWVY QYAVVSKELN LSDTRAIQDW NLKFALAKAG GVAEVASAGG
FVRQYNVVLD PQRMRDRGIT MQKMRDAIRA SNADVGGRTV ELSEFEYVVR GRGYIRNIND
LGDIVLKTDN GTPVLLRDVA RVELGPDERR GITELNGEGE VTSGIILQRF GANALDVINN
VKKRFQEIAT SLPKSVEIVP VYDRSTLINA AIETLKHTLV EESIIVALVC IVFLLHVRSA
MVAILMLPVG VLIAFGAMKL LGIGSNIMSL GGIAIAIGAM VDAAIVMIEN AHKRLERAAP
GQSRLQILID AASEVGPALF FSLLIITVSF MPIFTLESQE GRLFSPLAFT KTFAMAAAAL
LSVTLVPALM VIFVRGRIVP EHKNPINRFL IWIYRPVIKG VMRARALVIV LALAILAVTV
WPARQLGTEF MPDLNEGTLL YMPTTLPGIS VTKAGELLQT QDRIIRSFQE VASVFGKAGR
ASTATDPAPS EMFETVINLK PKEQWRPGVT IDSLIAEMDK ALQFPGVSNA WTMPIKARID
MLSTGIRTPV GVKVIGPDLV GIDKLAKRVE RVLKAVPGTS SAYAERGIGG YYLDITPDRA
ALARYGIMIQ DVQDVIATAL GGQTVTTTVE GRQRFSVNMR YPRDLRDSPR KIASDVLVPM
PQGGAVPLGE VARITLDRGP TSIRTENGQL AAYVYVDIRD RDLGGYVADA QKAVQASIAF
PPGYYVIWSG QYEYLERATA RLKIVVPVTL LIIFLLLYLN FRSITETMIV MLSLPFSLVG
GLWLMWWLGF NLSVAVAVGF IALAGVAAET GVVMLIYLNQ AYAEIEARRA AEGRSVTRKD
LYDAVMEGAV GRVRPKMMTV VAIMAGLLPI MWSTGIGSEI MQRIAVPMIG GMVSSTLLTL
IVIPAIFGLI KGIGLRDGNG HQPPAHTGSV ERTIAPELVE
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