| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1849 |
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| Symbol | |
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| ID | 4033026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2058854 |
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| End bp | 2059837 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637970321 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_577123 |
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| Protein GI | 92117394 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.134036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGACGT TCACGATAAT CGTCGCGGCT GCGGCGGTCC TGGCGATCGG GGGCGCCGGC
TACTGCATCA TGGGGCCGGC GACGCCCAAC GCGCCGGTGA CGCAGACAAG CCATAGGGAC
GAGAAGATCG CAAATGGCCA TGTCGAGCAG GACGAGCACG GTGCCGACCG CATTCTGATC
AGCGACGTCA AGCTCGCCGC CGCCGGTGCG ATACTCGCCG AGGCCGGGGA GGCCACGCTC
AGCGATACGC TGTCTTTCAA CGGCGTGCTG CGCGCCAACC AGGAGGCGGT GGTTCAGGTC
ACGCCGCGTT TTCCGGGTAT CGTCCGCTCG ATCAAAAAGC GAATCGGCGA CGCGGTCGCC
AAAGACGACC AGCTCGCCTC GATCGAAAGC AACCAGAGCC TTACTGTCTA CGACCTGAAG
GCGCCGATCA GCGGTACCGT GATCGACCGT CAGATTTCGC TCGGCGAATA TGCCTCTGAA
CAGAAGCCGT CCTTCGTCGT CGCCGACCTG TCGACGATCT GGGTCGACCT GTCGATCTAT
CGTCAGGATT TGAAGCGCGT CCGGACCGGA GACGAAGTGC TGATCGACCC GGACGACGGC
GGCGCGGACA TCAAGGGCCA CATTTCCTAT GTCGCGCCGG TCGGATCGAG CGACACGCAG
ACGGCGCTCG CCCGGATCGT TCTGGCAAAT AAGGACGGAC GCCTGCGTCC GGGACTGTTC
GTCACGGCGC GCCTTGTGCT GGCAAAGCGC AACGTGCACG TCGCCGTGCG CGTGGGAGCG
ATTCAGACGC TGGAAAACAA GACGGTCGTG TTCGTCCGGG AGGGCGGAGA CAAGATCGAG
GCCCGCCCCG TCGAGCTTGG AGACTCCGAT GCGAGGTTCG TGGAGATCCG GGCGGGACTG
TCGGCGGGAG AGCCCTATGT CGCCGAGAAC AGCTTCGTCG TGAAGGCGGA GATGGGCAAG
GGTGAGGCCG AACATGAACA TTGA
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| Protein sequence | MRTFTIIVAA AAVLAIGGAG YCIMGPATPN APVTQTSHRD EKIANGHVEQ DEHGADRILI
SDVKLAAAGA ILAEAGEATL SDTLSFNGVL RANQEAVVQV TPRFPGIVRS IKKRIGDAVA
KDDQLASIES NQSLTVYDLK APISGTVIDR QISLGEYASE QKPSFVVADL STIWVDLSIY
RQDLKRVRTG DEVLIDPDDG GADIKGHISY VAPVGSSDTQ TALARIVLAN KDGRLRPGLF
VTARLVLAKR NVHVAVRVGA IQTLENKTVV FVREGGDKIE ARPVELGDSD ARFVEIRAGL
SAGEPYVAEN SFVVKAEMGK GEAEHEH
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