| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1844 |
|---|
| Symbol | |
|---|
| ID | 4033021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 2053890 |
|---|
| End bp | 2055326 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637970316 |
|---|
| Product | succinate-semialdehyde dehydrogenase (NAD(P)+) |
|---|
| Protein accession | YP_577118 |
|---|
| Protein GI | 92117389 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACTATC AGAACACATC GCTGCTGATC GACGGCAAGT GGCGTCCCGG TGCGTCCGGC
AAGACTATCG CCGTGCTTAA CCCTGCTACC GAAGAGCAGA TCGGCACGGT GGCTCATGCG
GATCGCGCCG ACCTCGACGA GGCGCTCGCC GCTGCCGACA GGGGCTTCAA GGTCTGGCGC
GCCGTCGCAC CTTTTGAGCG CGGCAAGATC ATGCGAAGAG CGGCGGCCTT GATGCGGGAG
CGCGCCGACA AAATCGCAAC GCTGATGACC TTGGAGCAGG GCAAGGTTCT TGCCGAGGCC
AGGATCGAGA CGCTATTTGC GGCCGACGTC ATCGAATGGT TTGCAGAAGA ATCCCGCCGA
GCCTATGGCC GGGTGATTCC GGCGCGCGGA CCCGGTATCT ACCAGATCGC GATCAAGGAG
CCGGTCGGCC CGGTGGCGGC TTTCACGCCG TGGAATTTCC CGATCAATCA GGTCTGCCGC
AAGCTGTCGG CCGCGCTCGC CGCCGGCTGC TCGATCATCG TCAAGGCACC CGAGGAAACA
CCGGCGTCTC CGGCCGAACT GCTCCGCGCG TTCGTCGATG CGGGCGTACC CGACGGCGTG
ATCAATCTCG TATTCGGCGT GCCTGCCGAA ATCTCCGAAT ACCTCATCCC GCATCCGATC
ATTCGGAAGA TGTCGTTCAC GGGCTCGACC GCGGTCGGCA AGCAACTCGC AGCGCTGGCC
GGACTGCACA TGAAGCGCGC GACGATGGAG CTTGGCGGCC ACGCGCCGGC AATCGTGTTC
AACGACGCCG ACATTGCAAG CGCCGCGAAG ATCATCTCGG GCGCCAAATT CCGCAACGCC
GGCCAAGTCT GCATCGCACC GACGCGCCTT CTCGTACAGG ACAAGGTCTA TAAGGATTTT
GTCGGCAAGT TCACCGAAGC CGCCAAGGCG ATCAAGGTCG GCAACGGTCT CGACGCCGAT
TCAACGATGG GCGCGCTCGC CAATCCCCGC CGCATGACCG CCATCGAGAG CTTCGTGCAG
GACGCGGTGG GAAAAGGCGG CAGGCTCGCG GCCGGCGGTC ATCGTGTCGG CAACAAGGGT
TATTTTTTCG AGCCGACCGT GGTCACTGAT GTGCCGAAGG ATGCCCGCGC CATGAACGAG
GAGCCGTTCG GCCCGTTGGC GCTGATCACG CCGTTCTCGA CCTTCGAGGA GGCCGCGGAG
GAGGCGAACC GCCTGCCGTA TGGCCTCGCG TCTTACGCCT TCACCAGTTC GACCAAGACC
GCGACCGCTA TCGGCGCGGG GATCGAGAGC GGCATGGTGG CGATCAACAA TGCCGGCCTG
GCTCTGCCGG AAAATCCGTT CGGAGGGGTC AAGGATTCAG GCTACGGCTC CGAGGGCGGA
ATCGAGGCGA TGGAAGCCTA TCTCATCACC AAGTTCATCA GCCAGACGGG GGTGTAA
|
|---|
| Protein sequence | MNYQNTSLLI DGKWRPGASG KTIAVLNPAT EEQIGTVAHA DRADLDEALA AADRGFKVWR
AVAPFERGKI MRRAAALMRE RADKIATLMT LEQGKVLAEA RIETLFAADV IEWFAEESRR
AYGRVIPARG PGIYQIAIKE PVGPVAAFTP WNFPINQVCR KLSAALAAGC SIIVKAPEET
PASPAELLRA FVDAGVPDGV INLVFGVPAE ISEYLIPHPI IRKMSFTGST AVGKQLAALA
GLHMKRATME LGGHAPAIVF NDADIASAAK IISGAKFRNA GQVCIAPTRL LVQDKVYKDF
VGKFTEAAKA IKVGNGLDAD STMGALANPR RMTAIESFVQ DAVGKGGRLA AGGHRVGNKG
YFFEPTVVTD VPKDARAMNE EPFGPLALIT PFSTFEEAAE EANRLPYGLA SYAFTSSTKT
ATAIGAGIES GMVAINNAGL ALPENPFGGV KDSGYGSEGG IEAMEAYLIT KFISQTGV
|
|---|
| |