Gene Nham_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1833 
Symbol 
ID4033010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2041328 
End bp2041954 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID637970305 
ProductCinA-like 
Protein accessionYP_577107 
Protein GI92117378 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.911534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGCA GCGACACACG CGCCCTGTCG CGTTCGCTGC TCGACCTTTG CCGGATGCGC 
AAGCTCACCA TCGCAACGGC CGAATCCTGT ACCGGCGGGC TGGTCGCCGG CGCGCTGACC
GACATTCCCG GCTCCTCGGA CGTGATCGAT CGCGGTTTCG TCACCTATTC CAACGACGCC
AAGCGCGCGA TGCTGGGCGT CAAGGCCAGC ACCCTCGACA GTTTTGGCGC GGTCAGCAAG
GAAACCGCAA CCGCCATGGC GGTCGGCGCG CTGGAACGCG CCGGCACCGA TCTGGCCGTC
GCCATCACCG GAATTGCGGG TCCCGGTGGC GCAACGCCCG GCAAGCCCGT GGGCCTCGTT
CATTTCGCTG CCGCCGCGCG TGACGGCCGC CTGACCCATC GCGAATGCCG CTTCGGAGCG
ATCGGCCGCA ACTCGGTGCG GCAACGTTCG GTCGTCGAAG CGCTGCGGAT GCTGATGGAG
CTGGCGCGGG GACCCAAGCC GCCCGCAAAA GTCCGGCGCG AAAGCGTCAG CCGCTTACGG
CCGCGAACGG CGCGAGCGCC GTTGCGTCGT GTGGCCGAGC GGCGCCGGAC CGCAGGACCG
CTAAAACCCT CTCCGAAGAA AACCTGA
 
Protein sequence
MGGSDTRALS RSLLDLCRMR KLTIATAESC TGGLVAGALT DIPGSSDVID RGFVTYSNDA 
KRAMLGVKAS TLDSFGAVSK ETATAMAVGA LERAGTDLAV AITGIAGPGG ATPGKPVGLV
HFAAAARDGR LTHRECRFGA IGRNSVRQRS VVEALRMLME LARGPKPPAK VRRESVSRLR
PRTARAPLRR VAERRRTAGP LKPSPKKT