| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1820 |
|---|
| Symbol | |
|---|
| ID | 4032997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 2020534 |
|---|
| End bp | 2021505 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637970292 |
|---|
| Product | thiamine-monophosphate kinase |
|---|
| Protein accession | YP_577094 |
|---|
| Protein GI | 92117365 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCTCCG GTGAAGACGA TCTGATTGCA CGCTACTTTA AGCCGATCGC GGCCGATCCC
GGCGCGCTGC GGCTCGCTGA CGACGCGGCT GTTTTGAAAG GCGGCGGCGA CGATCTCGTG
GTCACGACCG ATGCCATTGT CGAAGGTGTG CATTTCCTGA GCAACGATCC GCCGGAAACG
GTCGCGAAGA AGGCCTTACG GGTTAATCTC TCCGACCTTG CCGCCAAGGG AGCAACGCCT
GCCGGATTCG TCCTGACGCT GGCATTGCGT GACGCCAACG AGAGATGGCT CGCGCCATTC
GCGCGCGGGC TCGGCGACGA CGCGGCGGCG TTTCATTGTC CGCTGCTTGG CGGCGACACC
GTCTCGACGC CGGGGCCGCT GATGATTTCC ATCGCCGCTT TCGGCCGTGT TCCGCCCGGC
GGAATGGTCA TGCGCAGCCG CGCGGAGCCG GGCGATCGCA TCGTCGTCTC AGGCACGATT
GGCGATGCGG CGCTGGGGCT CGCCATTCTC AAGGGCAAGC TCATGGCCAG CGACGCTGCG
GTCCGAGAGA CGCTGCTCGG CCGCTATCGG ATTCCGCAGC CGCGTATCGG CCTCGCCGGC
GCGTTGCGGA ATTATTCACG TGCCGCGATG GACGTTTCCG ATGGCCTGGC CGGCGATCTC
GCAAAACTGT GCGCGGCATC GGGCGTCTCG GCGGTGATCG ATGCCGCGTC CGTTCCGTTG
TCCGAGGCCG TGCGCGGACT GATGCAGCAG GGTCAGACGA GTCTTGCAAC CGCGGTGAGC
GGCGGCGACG ATTACGAGAT CTTGTGTACG ATCCCGGAGG ATCGCTTCGA GGCTTTCGCA
GAGGCGGCGC GCGGCGTCGG CGTCGCAGTA ACGTCGATCG GGGCGGTGGT CGCGGGCAAG
ACGGCGCCGA AATGGCTTAA TGCGGAAGGC AAGGAGATCG CACTACCACG GCTTTCCTAC
AGTCATTTCT GA
|
|---|
| Protein sequence | MSSGEDDLIA RYFKPIAADP GALRLADDAA VLKGGGDDLV VTTDAIVEGV HFLSNDPPET
VAKKALRVNL SDLAAKGATP AGFVLTLALR DANERWLAPF ARGLGDDAAA FHCPLLGGDT
VSTPGPLMIS IAAFGRVPPG GMVMRSRAEP GDRIVVSGTI GDAALGLAIL KGKLMASDAA
VRETLLGRYR IPQPRIGLAG ALRNYSRAAM DVSDGLAGDL AKLCAASGVS AVIDAASVPL
SEAVRGLMQQ GQTSLATAVS GGDDYEILCT IPEDRFEAFA EAARGVGVAV TSIGAVVAGK
TAPKWLNAEG KEIALPRLSY SHF
|
|---|
| |