Gene Nham_1815 details

Gene Information

• Locus tag: Nham_1815
• Symbol: nrdR
• ID: 4032992
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 2017078
• End bp: 2017560
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637970287
• Product: transcriptional regulator NrdR
• Protein accession: YP_577089
• Protein GI: 92117360
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTGCC CGAGCTGCAA CAGTCTGGAT ACCCAAGTGA AGGATTCCCG GCCGACCGAG 
GATTCGGCCG TCATCCGTCG CCGGCGCGTT TGCATGGCCT GCAATTTCCG CTTCACGACG 
TTCGAGCGGG TGCAACTGCG CGAACTCACG GTCATCAAGC GTAACGGGCG GCGGGTGCCG 
TTCGACCGCG ACAAGCTGGT ACGTTCGCTG CAAATCAGCC TGCGCAAACG GCCGGTTGAG 
CCCGAGCGCG TCGAAACCAT GGTGTCGGCC ATCGTCCGTG AACTCGAGAG CGGCGGCGAG 
GCGGAGATTT CCTCCGAGAT CATCGGCGAG ATCGTAATGG AACATCTGCG GAGCCTCGAC 
GATGTCGCCT ATGTGCGCTT CGCCTCGGTT TATCGCAATT TCCGGGAGGC CAAGGACTTC 
GAGGCGGTGC TGGGCGAACT CTCCAGCGAG GACGACGCGC GGCCTGTGCC GCTGCGCAAA 
TGA 

 

Protein sequence

MRCPSCNSLD TQVKDSRPTE DSAVIRRRRV CMACNFRFTT FERVQLRELT VIKRNGRRVP 
FDRDKLVRSL QISLRKRPVE PERVETMVSA IVRELESGGE AEISSEIIGE IVMEHLRSLD 
DVAYVRFASV YRNFREAKDF EAVLGELSSE DDARPVPLRK