Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1810 |
Symbol | |
ID | 4032987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2010434 |
End bp | 2012104 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637970282 |
Product | hypothetical protein |
Protein accession | YP_577084 |
Protein GI | 92117355 |
COG category | [S] Function unknown |
COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.131395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCGGA CGGGGGCGCT TCGGATTGCG ATGACGGCGA CTGCGCTGGC GCTCGGCGGC ATGATGGCGC AGGCCCAGCA GGTCGGCACG GCCTCGGCGG TCAATCCGGC CGCGACCGCC AACCTCAAGA CCATCACCAT CGGTCAGTCG ATCGCTCATA AGGAACGCAT CCAGACCAAG TCCAGCGGTT CGGTGCAACT GCTGTTCCTC GACAAAACCT CGATGACCAT CGGTCCGAAC AGCGACATCA CGATCGACGA ATACGTCTAT GATCCCAGCG CCAACACCGG CAAGCTGGCG GCGACCCTCG GCAAGGGCGC GCTGCGTTTC GTCGGCGGCC AGATCAGCCA CAACGGCGAT GCGGAGATCA AGACCGCGTC GGCTTTGATC GGCATTCGCG GCGGCGTGAT GATGACCGAC GGCAAGGGCG GCATCTATTC CGGCTACGGC ACCATGACCG TCAGCTCCGG CGGGCAGACC GTGTCGCTGG GCGCGGGCGA ATTCACCCAG ACACAACCCG GCGGACCGCC GACGCCGCCC GGACTGCCGC CACCGGGATT CGTGCAGCAA CTGATCGCGG CATTCCAGAG CGCCGCCGGC CAAACGGGCG GCGTACGCGC GGGCACGGCA TCGGCGAAAA ATATCGCGTC CGCCGAGCAA AAGGCGACCG GGTCGCCCGG CGGATCGGTA ACCGGCTCGA ATGTGCCGAC AACGCCTCCG CCGATCGTCG AACTTATCAA TGCGATTTCG TCGGCCTTCA CCCAGTCGGT GCAGACGTCC AGTCAGTCGG CTGCTGTGCA GCAATTCGTG CACGATCAGC CGACAGGCAA CGACAATCCA CCGCCCGTTG ATAACACTCC ACGGCCAACT GTGACGCTGA CCGGATATGC CGGTGGCATG GATATCATCG CGGGCCACTC GTTGACCGGG ACGGTCAATA TCGGTCTCGA TGCCACGGCC AACACGGCGC AAGCAGCCGT GACGGTTTCC GACCCTTCAA ATCCGAACAC TTCGACCCGG ATATTCCAGT TCGATCCCAC AACGGGCGGC TATGGCGACT ATAAAAATTT CGTCGCGATC TCGTCCAACG GTGCGCTAGG AACCACAGAC AATCAAACCG TTCTGCAGGC CATTTCTACC GCAATTCCCA ACCTGACTCC GTGTCAGTGC GAGTATACAC GCTGGGGACT CTGGGTAGAG ACAGGATCGG CCACCACCAC CACCAATGGC CCCACTGCTT CGCCTTCAGA AGGCATAGTC GGCTGGTGGG TCGCCGGTCG GCCAGTGGGC AGCATCGGTG ACGTGCCTAC GACGGGCCTG GCAACCTACA CCGGCCATGT CATTGCCACC GTGAACAGCA ACGCGGGCTT CGCCGCCGGC AACTTCTCCA ACACCGTCGA TTTCGGTGCG CGAACCGGCG CGGTGAGCGT GACCAATCTC GACAACACCA ACTATACAGG CAACGTGAAT TTTAACACCG ACGACCGGCG TTATTTCGGC GGCACAATCG ACAGTACCAA CGTCCGCGTC GACGGTCGCA GCATGGCCCT GCAAGGCAGC TTCTTCCAGG GCGCGCGCAG CCCAGTCGGC GAAATGGGCG GGAGCGTCGC GATTTCCAGT ACCAAAGACA ACTACCTCGG CAGCGGAATT TTCGCGGCAA GCCAGCGCTG A
|
Protein sequence | MSRTGALRIA MTATALALGG MMAQAQQVGT ASAVNPAATA NLKTITIGQS IAHKERIQTK SSGSVQLLFL DKTSMTIGPN SDITIDEYVY DPSANTGKLA ATLGKGALRF VGGQISHNGD AEIKTASALI GIRGGVMMTD GKGGIYSGYG TMTVSSGGQT VSLGAGEFTQ TQPGGPPTPP GLPPPGFVQQ LIAAFQSAAG QTGGVRAGTA SAKNIASAEQ KATGSPGGSV TGSNVPTTPP PIVELINAIS SAFTQSVQTS SQSAAVQQFV HDQPTGNDNP PPVDNTPRPT VTLTGYAGGM DIIAGHSLTG TVNIGLDATA NTAQAAVTVS DPSNPNTSTR IFQFDPTTGG YGDYKNFVAI SSNGALGTTD NQTVLQAIST AIPNLTPCQC EYTRWGLWVE TGSATTTTNG PTASPSEGIV GWWVAGRPVG SIGDVPTTGL ATYTGHVIAT VNSNAGFAAG NFSNTVDFGA RTGAVSVTNL DNTNYTGNVN FNTDDRRYFG GTIDSTNVRV DGRSMALQGS FFQGARSPVG EMGGSVAISS TKDNYLGSGI FAASQR
|
| |