Gene Nham_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1798 
Symbol 
ID4032975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1999728 
End bp2000129 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content60% 
IMG OID637970270 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_577072 
Protein GI92117343 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.225845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCATTA CTCCCGCGTT TGCTCAGGCC GCTGGTGCCG GCGATACCAA CAACTTGCTG 
ATGTCGCTGC TGCCGTTCGC GCTGATCTTT GTCATCATGT ATTTCCTGAT CATCCGGCCT
CAGCAGAAGA AGGCGAAAGA GCACAACGAG CTGGTGAAGA ATATCCGTCG CGGCGACATC
GTCATCACGA CAGGTGGTCT CGTCGGGAAG GTCACCAAGG TGGTGGATGA CGACCAGATC
GAGTTCGAGG TCGCGGACGG CGTCCGGGTG CGGCAGATGC GGCAGATGAT TTCGATCGTC
CGCGCCAAGG GCGAGCCGGC CAAGGGTGAA CCAACAAAGG GTGAGCCGAC AAAGGGGGGC
GCCAAAGGCG AGGGCGCCAA GGACGACAGC GCCGCGAGCT AA
 
Protein sequence
MFITPAFAQA AGAGDTNNLL MSLLPFALIF VIMYFLIIRP QQKKAKEHNE LVKNIRRGDI 
VITTGGLVGK VTKVVDDDQI EFEVADGVRV RQMRQMISIV RAKGEPAKGE PTKGEPTKGG
AKGEGAKDDS AAS