Gene Nham_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1770 
SymbolqueA 
ID4032945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1971963 
End bp1973060 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content65% 
IMG OID637970240 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_577044 
Protein GI92117315 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCTT ACAGTATGCG CACCGATCTC TTCGATTTCG AATTGCCGTC CGAGAGCATC 
GCGCTGCGTC CGGCGAGCCC GCGCGATTCG GCGCGGATGC TCGTGGTGCA GCCGGGAGCG
GGCTTGCACG ATCAACGGGT GAGCGATCTG CCGAAATGGC TGCGGCCCGG CGACCAGCTC
GTCGTCAACG ATACCCGCGT CATTGCCGCG CAGTTGCGCG GCCGCCGCAT TGGCCGCGAC
GCCGAGCCGA GGATCGAAGC GACGTTAATT AAACGCCTCG ACGGCTCGCG GTGGAACGCG
CTGGTCAAGC CGGCCAGGAA ACTTATCGCA GGAGACATCG TCCGCTTCGG CAATGAGGGA
CGGGTGTGCT TCCTCGGGCA TCTGGATGCG CAGGTCGAAA GCAAGGGCGA GGAGGGCGAG
GTCACGTTCG CCTTTTCGTT TCATGGGCCG ACGCTGGATC AGGCCATTGC CGATCTGGGC
TCACCGCCGC TGCCGCCCTA CATCGCCTCG AAGCGCGAGC CAGACGATCG CGATGTTGCG
GACTATCAGA CCATGTTTGC GGTCCATGAG GGCGCGGTCG CCGCGCCGAC CGCGGGGTTG
CACTTCACGC CGGCGGTGGA AGCGGTGCTG CGCGAACGCG GCGTGGGCCT TCATCGGTTG
ACCCTGCACG TCGGCGCCGG CACGTTTCTT CCGGTGAAAA CTGAGGACAC CGTCGGGCAC
CGCATGCATT CGGAGTGGGG CACGATTTCC GCCGAGACCG CCGATGCGCT GAACGCGGCG
CGGGCGAGCG GCGGCCGGAT CGTCGCGGTC GGAACGACAT CGCTGCGGCT TTTGGAGAGC
GCGACAGCGG ACGACGGCCG GATAGCGCCG TTCACCGGCG AGACCGCGAT CTTCATCACG
CCGGGCTATC GCTTCCGCGC CGTCGATATC CTGATGACGA ATTTTCATTT GCCGCGGTCG
ACGCTGTTCA TGCTGGTCTC GGCCTTCAGC GGCCTTGAAA CCATGAAACA GGCATACGCT
CACGCCATCG CCGCAGGCTA CCGGTTTTAT TCCTATGGCG ACGCCTGCCT GCTGTTTCCG
GGCACGTCCG ACGCATGA
 
Protein sequence
MTAYSMRTDL FDFELPSESI ALRPASPRDS ARMLVVQPGA GLHDQRVSDL PKWLRPGDQL 
VVNDTRVIAA QLRGRRIGRD AEPRIEATLI KRLDGSRWNA LVKPARKLIA GDIVRFGNEG
RVCFLGHLDA QVESKGEEGE VTFAFSFHGP TLDQAIADLG SPPLPPYIAS KREPDDRDVA
DYQTMFAVHE GAVAAPTAGL HFTPAVEAVL RERGVGLHRL TLHVGAGTFL PVKTEDTVGH
RMHSEWGTIS AETADALNAA RASGGRIVAV GTTSLRLLES ATADDGRIAP FTGETAIFIT
PGYRFRAVDI LMTNFHLPRS TLFMLVSAFS GLETMKQAYA HAIAAGYRFY SYGDACLLFP
GTSDA