| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1750 |
|---|
| Symbol | |
|---|
| ID | 4032792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1950874 |
|---|
| End bp | 1952298 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637970221 |
|---|
| Product | pyruvate dehydrogenase subunit beta |
|---|
| Protein accession | YP_577025 |
|---|
| Protein GI | 92117296 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATCC AAGTTCTGAT GCCCGCGCTT TCGCCGACCA TGGAGAAGGG CAACCTCGCC
AAGTGGCTGA AGAAGGAGGG CGAGACGGTC AAATCCGGCG ACGTCATCGC CGAGATCGAG
ACCGACAAGG CGACCATGGA AGTCGAGGCG ACCGACGAGG GCACGCTCGG CAGGATTCTG
GTGCCGGAAG GCACCAACGA CGTCGCGGTG AATACGCCGA TCGCAACCAT TCTTGCCGAC
GGCGAAAGTG CGGCTGATCT CGGCAACGCG GAAGCGCCGA AGGCCGCCAA AACGCCGGTC
ACTCCCGCCC AGGACGTTTC GAAGGACGTG GCGGAATCCC GTTCGCCGGT CGGCGAGGGC
AAGCCGATGA TCTCGGACCC GAAACGACCC GCCGGGCCGG CGATGGAGAT TCCCGAGGAT
CCCGACATTC CTGCCGGCAC CGAGATGGTG ACCATGACCA TCCGCGAGGC GTTGCGTGAT
GCCATGGCCG AGGAGATGCG CCGCGACGGC GACGTCTTTC TGATGGGAGA GGAGGTCGCC
GAATATCAGG GCGCCTACAA GGTGTCGCAG GGCCTGCTGG CGGAATTCGG CGCACGGCGC
GTGATCGATA CCCCGATCAC CGAGCACGGT TTTGCCGGCG TCGGCGTCGG TGCGGCGTTT
GCCGGCCTGA AGCCGATCGT CGAGTTCATG ACCTTCAACT TCGCGATGCA GGCGATCGAC
CAGATTATCA ACTCCGCCGC CAAAACGCTT TACATGTCCG GCGGACAGAT GGGCTGCGGA
ATCGTGTTTC GCGGTCCGAA CGGCGCCGCC GCCCGCGTCG CCGCCCAGCA CAGCCAGGAC
TATTCGGCCT GGTACTCGCA AATCCCCGGC CTCAAGGTGA TCGCGCCGTA TTCCGCCGCC
GACTACAAGG GGCTTCTGAA GGCCGCGATC CGCGATCCCA ATCCGGTGAT CTTCCTCGAG
AACGAAATTC TTTACGGACA CACCGGGCCG GTGCCGAAGC TCGACGACTA CGTGCTGCCG
ATCGGCAAGG CGCGGATCGC GCGTGTTGGT CAGCACGTCA CGCTGGTCGC ATGGTCGAAC
GGCATGACCT ATGCGCTGAA GGCCGCCGAT GAACTCGCCA AGGACGGCAT CGAGGCCGAG
GTCATCGACC TGCGCACGCT GCGCCCGATG GATACCGAAA CCATCGTGGC CTCGGTGCGG
AAGACCGGGC GCGCGGTGAC CGTGGAAGAG GGCTGGCAGC AGTCGGGCGT GGGCGCCGAG
ATCGTCGCGC GCATCATGGA ACACGCGTTC GACTATCTCG ACGCACCGGT GATGCGCGTT
TCGGGAAGGG ACGTGCCGAT GCCGTATGCG GCCAATCTCG AAAAGCTGGC GCTGCCGTCG
GTGGCCGAAG TCGTCGAGGC GGCCAAGGCC GTCTGTTATC GGTGA
|
|---|
| Protein sequence | MPIQVLMPAL SPTMEKGNLA KWLKKEGETV KSGDVIAEIE TDKATMEVEA TDEGTLGRIL
VPEGTNDVAV NTPIATILAD GESAADLGNA EAPKAAKTPV TPAQDVSKDV AESRSPVGEG
KPMISDPKRP AGPAMEIPED PDIPAGTEMV TMTIREALRD AMAEEMRRDG DVFLMGEEVA
EYQGAYKVSQ GLLAEFGARR VIDTPITEHG FAGVGVGAAF AGLKPIVEFM TFNFAMQAID
QIINSAAKTL YMSGGQMGCG IVFRGPNGAA ARVAAQHSQD YSAWYSQIPG LKVIAPYSAA
DYKGLLKAAI RDPNPVIFLE NEILYGHTGP VPKLDDYVLP IGKARIARVG QHVTLVAWSN
GMTYALKAAD ELAKDGIEAE VIDLRTLRPM DTETIVASVR KTGRAVTVEE GWQQSGVGAE
IVARIMEHAF DYLDAPVMRV SGRDVPMPYA ANLEKLALPS VAEVVEAAKA VCYR
|
|---|
| |