Gene Nham_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1726 
Symbol 
ID4030345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1924990 
End bp1926612 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content59% 
IMG OID637970198 
Productphage terminase 
Protein accessionYP_577002 
Protein GI92117273 
COG category[R] General function prediction only 
COG ID[COG4626] Phage terminase-like protein, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.18547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGATC CATACCCGCA TTGGCTATTT GACGACTCGC CGATCGATGA TCCGTTTGGA 
TACGGCGAGC GCGCGGTTAA GTTTCTGCGC CGGCTTAAGC ATCCAAAGAG TCGCTTGCCG
GGCAATGCAT TCCAGCTTGA TCCATGGCAA GAGCGTATCG TGCGCCGCAT TTACGGACCG
CGCAATCCTG ATGGCTCGCG CGTCGTTAAA ACAGTGGTCC TGCTAATCCC TAGAGGCAAT
CGCAAAAGCA GCCTGTCGGC CGCGATTTCG CTGCTTCACG CCATCGGCCC GGAGAAAATC
CCCGGCGGTG AATGCGTGCT GGCCGCCGCA GATCGTAAGC AAGCCTCGAT CGCCTTCAAA
GAGGCCGTCG ACGTCGTGCG GATGGATAAG CGGCTTGTAT CGGCCACGCG CATCTATGAC
GCCTTCAATT CAGCGAAGAA AATCGTCCTG AAAAAGGGCG GCAGCTTTAT CGAAACCATT
AGCAGCGATG CCGGCACGGC TCACGGAAAG AGCATTGCGC TGCTTGTGGC AGACGAACTG
GCACAGTGGC GAGGCACTGA CCTTTGGATT GCGCTGAAGT CGTCGTTGCC GAAGGTGAAG
GACTCGCTGT TGGTGGTTGC GACGACTTCC GGCCGCGGCC AGGACAATCT CGCGTGGGAG
ATCGTCGACC GTGCGCGCAA GGTTGCGACG GGCGAGATCA ATGACCCTTC CATGTTGCCG
ATCCTGTTCG AGACCGACGC GGGCGCGGAT TGGAAAGACG AGGCGCTGCT TTATCGCGCC
AACCCCGGCC TGACATTGGG ATATCAAGAC ATCTCCGGCT TGCGACAGCT TGTGCGGGAA
GCTGAAACCA GCATGACGGC TAGGGACATG GTGCAGAATC TCCACCTCAA TGTCTGGCTT
GATAGTTCCG CGGCACCGTT CGTCGATATG ACGGTCTACG ACGAAGGCGC CGGCGAAATA
GACCTTGCAG CGCTTGAAGG CGAGCCTTGC TGGCTGGGCG TCGACCTTAG CTCTAGCATC
GACCTCTCGG TCATTGTCGC GGCCTTCCGT GATGGCGATG ATGGTTACAT CGTGGTGCCT
TACTTCTTTT GCCCGGCCGA CAACTTGCGA CAGAGGCAGG AAGCTACAGG CGCTCCATAC
ATCGACTGGC AAGCCCGCGG GCTGATCGAG GCCACGCCTG GCAACGTCAT CGATTTTCGC
CGCGTTGAGG AACGCGTTCG CGAACTGTGC GAGACCTATT CTGTGCAGGA GATCGCGGTC
GATCCGGCCA TGGCGCGAAA CCTAATGAAC AACCTTTTAG AGGATGGACT CCCGGCCGTC
GAACACCGGC AAGGTTCGTT GTCGATGATG CCAGCTATAG CGAACCTTGA GCGCGCCATC
GTTGGGCGCA AGTTCAAGCA TGGCGGCAAT GAGCCGTTGC GGTTCTGCTT TGCGAACGTC
GAGGCGCAGA CGAATTCGTC TGGCCATGTC GTGCGGTTCA CCAAATCAAA GAAGTGGTTA
TCGATCGATG GAGCCGTCGC GGCGGCCATG GCGGCGCATC GGGCGAGCGC TGGCGGCAGT
GCGGCGGCGA CGTCGCTGTA CGATGACCCG GAATGGGAAA CGGCGCTGGC GGGGTTTAAT
TAG
 
Protein sequence
MKDPYPHWLF DDSPIDDPFG YGERAVKFLR RLKHPKSRLP GNAFQLDPWQ ERIVRRIYGP 
RNPDGSRVVK TVVLLIPRGN RKSSLSAAIS LLHAIGPEKI PGGECVLAAA DRKQASIAFK
EAVDVVRMDK RLVSATRIYD AFNSAKKIVL KKGGSFIETI SSDAGTAHGK SIALLVADEL
AQWRGTDLWI ALKSSLPKVK DSLLVVATTS GRGQDNLAWE IVDRARKVAT GEINDPSMLP
ILFETDAGAD WKDEALLYRA NPGLTLGYQD ISGLRQLVRE AETSMTARDM VQNLHLNVWL
DSSAAPFVDM TVYDEGAGEI DLAALEGEPC WLGVDLSSSI DLSVIVAAFR DGDDGYIVVP
YFFCPADNLR QRQEATGAPY IDWQARGLIE ATPGNVIDFR RVEERVRELC ETYSVQEIAV
DPAMARNLMN NLLEDGLPAV EHRQGSLSMM PAIANLERAI VGRKFKHGGN EPLRFCFANV
EAQTNSSGHV VRFTKSKKWL SIDGAVAAAM AAHRASAGGS AAATSLYDDP EWETALAGFN