Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1718 |
Symbol | |
ID | 4030318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1920928 |
End bp | 1921458 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637970190 |
Product | peptidase U35, phage prohead HK97 |
Protein accession | YP_576994 |
Protein GI | 92117265 |
COG category | [R] General function prediction only |
COG ID | [COG3740] Phage head maturation protease |
TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.806315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGACTG ACCATGGCAG CGTCTTTGAA TTGGACATTA AGTCAATCCA GGAAGACGGC ACATTCACGG GATACGCGAG CGTCTTTGAC GTTGTCGATA GCCACAAAGA TATCGTGGTC AAGTCGGCGT TTAAGAAGTC GCTCGTAAAA CGGCCCGCCG CGAAAGTCAA AATGCTTCGG GAGCATGACC AAACTGAACC GATCGGCAAG TGGTTGTCGC TGGTCGAAGA TGACCGCGGA TTGAAAGCAA CGGGTCAGCT TATTCTCGGT ACCACGAAAG GCTCCGAGAC CTACAAGCTG ATGAAGGCCG GCCTGCTCGA TAGCCTATCC ATTGGCTACC GCACCGTGCG CGACCGCATG GACCGCACAA AGGGTGCGCG CATCCTTGAG CAGGTAGACC TCTGGGAAAT CTCGGTGGTC ACCTTTCCCA GCAACACGGA ATCCACCGTC ACCGCAGTGA AATCCAATTC CGCAACGCAG TTTCGCGAGT TAGTTGCGGC GATCAACAGT GCTCGCAATC TACTTCATTA A
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Protein sequence | MKTDHGSVFE LDIKSIQEDG TFTGYASVFD VVDSHKDIVV KSAFKKSLVK RPAAKVKMLR EHDQTEPIGK WLSLVEDDRG LKATGQLILG TTKGSETYKL MKAGLLDSLS IGYRTVRDRM DRTKGARILE QVDLWEISVV TFPSNTESTV TAVKSNSATQ FRELVAAINS ARNLLH
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