Gene Nham_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1718 
Symbol 
ID4030318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1920928 
End bp1921458 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content54% 
IMG OID637970190 
Productpeptidase U35, phage prohead HK97 
Protein accessionYP_576994 
Protein GI92117265 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.806315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGACTG ACCATGGCAG CGTCTTTGAA TTGGACATTA AGTCAATCCA GGAAGACGGC 
ACATTCACGG GATACGCGAG CGTCTTTGAC GTTGTCGATA GCCACAAAGA TATCGTGGTC
AAGTCGGCGT TTAAGAAGTC GCTCGTAAAA CGGCCCGCCG CGAAAGTCAA AATGCTTCGG
GAGCATGACC AAACTGAACC GATCGGCAAG TGGTTGTCGC TGGTCGAAGA TGACCGCGGA
TTGAAAGCAA CGGGTCAGCT TATTCTCGGT ACCACGAAAG GCTCCGAGAC CTACAAGCTG
ATGAAGGCCG GCCTGCTCGA TAGCCTATCC ATTGGCTACC GCACCGTGCG CGACCGCATG
GACCGCACAA AGGGTGCGCG CATCCTTGAG CAGGTAGACC TCTGGGAAAT CTCGGTGGTC
ACCTTTCCCA GCAACACGGA ATCCACCGTC ACCGCAGTGA AATCCAATTC CGCAACGCAG
TTTCGCGAGT TAGTTGCGGC GATCAACAGT GCTCGCAATC TACTTCATTA A
 
Protein sequence
MKTDHGSVFE LDIKSIQEDG TFTGYASVFD VVDSHKDIVV KSAFKKSLVK RPAAKVKMLR 
EHDQTEPIGK WLSLVEDDRG LKATGQLILG TTKGSETYKL MKAGLLDSLS IGYRTVRDRM
DRTKGARILE QVDLWEISVV TFPSNTESTV TAVKSNSATQ FRELVAAINS ARNLLH