Gene Nham_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1708 
SymbolgltA 
ID4030308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1908386 
End bp1909687 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content59% 
IMG OID637970180 
Producttype II citrate synthase 
Protein accessionYP_576984 
Protein GI92117255 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.693797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAA CAAGCACAAA AACCGCAACG CTGACGGTCG ACAACACGAC CTATGAGCTT 
CCCGTTTTGA GTGGCACGGT CGGACCGGAC GTCATCGACA TCGCCAAGCT CTACGCGCAA
GCTGGCCTGT TCACTTATGA TCCTGCCTTC ACGTCCACCG CCAGTTGCCA GTCCAAGATC
ACCTATATCG ACGGCGACGC AGGCGTGCTC GAATATCGCG GTTATCCGAT CGAGCAGCTC
GCAGAAAAAG GCGATTTCCT CGAAACCTGC TATCTGCTGC TCTACGGTGA ACTGCCCACC
AAGTCGCAAA AATTCGATTT CGACCAGCGT GTCATTCACC ACACCATGGT TCACGAGCAA
ATGACGCGGT TCTTCCAGAG CTTCCGCCGC GACGCTCACC CCATGGCGGT CATGGTAGCT
GCGGTCGGCG CACTCGCCGC TTTCTATCAC GACTCCACCG ACATCAACGA TTCCAAGCAG
CGCATGATCG CATCCATGCG CATGATCGCG AAAATGCCGA CACTGGCTGC GATGGCCTAC
AAATATACCA TCGGCCAGCC GTTCATGTAT CCGAAGAATT CGCTGAGCTT TGCCGAGAAT
TTTCTCCAAA TGTGCTTCGC CGTGCCGTGC GAGGACTACG AGATCAACCC CGTCCTGGCG
GGTGCGCTCG ACACAATCTT CATCCTGCAT GCCGACCACG AACAGAACGC CTCGACATCG
ACCGTGCGCA TCGCGGGTTC GTCGGGCGCG AATCCGTTCG CGTGTATCGC AGCGGGCATC
GCCTGCCTGT GGGGACCGGC GCACGGCGGC GCCAACGAGG CGGCGCTGGC CATGCTCTCC
GGCATCGGAA CGGTCGACAG GATTCCCGAC TTCATAACGA GGGTGAAGGA CAAGAACAGC
GATGTCCGCC TGATGGGCTT CGGACACCGG GTCTACAAGA ACTACGATCC GCGCGCCAAG
ATCATGCAGA AGGTGTGTCA CGCGGTGCTC GATGAGACCG GCCACGGCGA CGATCCGATG
CTCAAGGTGG CGCTGGAGCT TGAGAAGATC GCCCTGAACG ATCAGTATTT CATCGATCGC
AAGCTGTATC CGAACGTCGA TTTCTATTCG GGCATCACGC TGAAAGCGAT GGGCTTCCCG
ACCTCGATGT TCACGGTTCT GTTCGCCGTC GCGCGCACTG TCGGCTGGAT CAGTCAGTGG
AGCGAGATGA TCGAGGATCC GCAACAGAAG ATTGGCCGCC CGCGGCAGCT TTATACCGGC
GCGGCGCGGC GCGATTACGT CGATATGGCC GACCGCAAAT AA
 
Protein sequence
MNATSTKTAT LTVDNTTYEL PVLSGTVGPD VIDIAKLYAQ AGLFTYDPAF TSTASCQSKI 
TYIDGDAGVL EYRGYPIEQL AEKGDFLETC YLLLYGELPT KSQKFDFDQR VIHHTMVHEQ
MTRFFQSFRR DAHPMAVMVA AVGALAAFYH DSTDINDSKQ RMIASMRMIA KMPTLAAMAY
KYTIGQPFMY PKNSLSFAEN FLQMCFAVPC EDYEINPVLA GALDTIFILH ADHEQNASTS
TVRIAGSSGA NPFACIAAGI ACLWGPAHGG ANEAALAMLS GIGTVDRIPD FITRVKDKNS
DVRLMGFGHR VYKNYDPRAK IMQKVCHAVL DETGHGDDPM LKVALELEKI ALNDQYFIDR
KLYPNVDFYS GITLKAMGFP TSMFTVLFAV ARTVGWISQW SEMIEDPQQK IGRPRQLYTG
AARRDYVDMA DRK