| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1707 |
|---|
| Symbol | lpxB |
|---|
| ID | 4030307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1907134 |
|---|
| End bp | 1908324 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637970179 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_576983 |
|---|
| Protein GI | 92117254 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACG GGACCGCCGC AAATAGCTCG CGAAGGATAT TTCTCATCGC GACCGAGGAG
TCGGGCGACC GCCTCGGTTC CAGCCTGATG AAAGTCCTGC GGCGGCGGCT CGATGATGCC
GTACGGTTCG AAGGCGTCGG CGGTCGGTCG ATGGCGCGCG AAGGCCTGGT GTCGTTGTTT
CCGATCGAAG ATCTGTCGAT CATGGGATTT GCGGCTGTGG TGAAGCAGCT TCCCATGATC
CTGCGGCGGA TACGCGAAAC CGCCGATGCC GTGATCGCGG CTGAGCCCGA CATGCTCGTC
ATTATCGACA GTCCCGACTT CACCCATCGC GTGGCGCGGC GGGTGCGTGC GCGGCGACCA
GCCTTGCCGA TCGTGGACTA CGTCTCGCCT TCGGTGTGGG CGTGGCGGCC CGGTCGGGCG
CGGGCCATGC GTCGCTATGT GGATCACGTG CTGGCGCTGC TGCCGTTTGA GCCGGAAGAA
TATCGCAGGC TCGCAGGGCC GCCTTGCACC TATGTCGGAC ATCCGCTGAT CGAGCAGGTC
GGAATGCTGC GGCCGGATGC ACAGGAACGC CAGCGGCGCG ATGCGCCGCC GCCGGCGCTT
CTGGTATTGC CCGGAAGCCG GCGCAGCGAG ATCGATCATC ATATGGCGGT GTTCGGCGAG
ACGCTGCGTA CGTTACAGCT GGACGCCGGC GAGATGGATG TGGTTCTCCT GACGATGCCG
CATCTGATCG AGAAGGTGAA AGCCGCAGTC GCGAGCTGGC CGCTGCAGCC CCGAATCGTC
GTTGGCGAGC AGGGCAAGCA AGCGGCTTTT CGTGTCGCCC GTGCAGCCCT CACGAAATCA
GGAACCGTCA CACTCGAGTT GGCGCTCGCG GGCGTGCCGA TGGTTACCGC CTATAGGGGG
GGCGCAGTGG AGGCCTGGAT CGCACAACGC GTGATCCGCA CGTCATCGGT GATTCTGGCC
AATCTCGTCA TTGGTGAAAA CGTCATTCCC GAATTTCTTC AGGAAAACTG TACGCCCGAG
AATCTTGCGC CGGCGCTTCG AGAGATTCTG ACAGACTCGC CGCTGCGGCG GCGTCAACTC
AAAGCGTTTG CCAAACTCGA TGCGATCATG GCAACGGGAC AGCACTCGCC GAGCGAGCGC
GCGGCGGATA TCGTCCTTGA AACAATGCAC GCGTCCCGCG GACCGGAGTA G
|
|---|
| Protein sequence | MADGTAANSS RRIFLIATEE SGDRLGSSLM KVLRRRLDDA VRFEGVGGRS MAREGLVSLF
PIEDLSIMGF AAVVKQLPMI LRRIRETADA VIAAEPDMLV IIDSPDFTHR VARRVRARRP
ALPIVDYVSP SVWAWRPGRA RAMRRYVDHV LALLPFEPEE YRRLAGPPCT YVGHPLIEQV
GMLRPDAQER QRRDAPPPAL LVLPGSRRSE IDHHMAVFGE TLRTLQLDAG EMDVVLLTMP
HLIEKVKAAV ASWPLQPRIV VGEQGKQAAF RVARAALTKS GTVTLELALA GVPMVTAYRG
GAVEAWIAQR VIRTSSVILA NLVIGENVIP EFLQENCTPE NLAPALREIL TDSPLRRRQL
KAFAKLDAIM ATGQHSPSER AADIVLETMH ASRGPE
|
|---|
| |