Gene Nham_1703 details

Gene Information

• Locus tag: Nham_1703
• Symbol: lpxD
• ID: 4030303
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1903907
• End bp: 1904992
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637970175
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_576979
• Protein GI: 92117250
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCAAC CCGCATTCTT TAAGCAGCCG CCGCCGTTGA CGCTGGTGGA GATTGCCGCA 
TCGACGGGGG CGCAGTTAAT CGACGCCTCC CGTGGTGAGC AGCGGATTAC CGGCCTCGCT 
TCGCTCGACC AGGCCGGGCC GATGCATCTC ACGTTTTTTG ACAATCACAA GTATGCCGCG 
CAACTGGCGG CGACCAGGGC GGGCGCCTGT TTCGTCAGCC CGCGATTCGA GGCCAGCGTA 
CCGGGCCACG TGGCTGTTCT GCGATCGGCG GCCCCGTTTC GTGCGTTCGT GAGGATCGCG 
CGAGACTGTC ATGCCGATAC GCTCCGGCCG CAATCCTGGT TCGACAATGC AACCATCGCG 
GCCTCCGCCG TCGTTCATCC GTCCGCGCAT CTCGAAGACG CGGTCGTCGT TGACCCGCTG 
GCGGTAATCG GTCCCGGAGT CGAAATCGGC ACCGGTTCGG TCATCGGTTC GGGCGCGGTG 
ATCGGCCCGG GTGTGCGGAT CGGCAGGAAT TGCAACGTCG GCGCAGGCAC GACGATCCAG 
GTTGCTCTTA TCGGCAACAA TGTTCTCATC CATCCCGGCT GTCATATCGG GCAGGATGGC 
TACGGCTTCA TTTTCTTCGG CTCCGAAGGC CATGTTAAGG TTCCGCAGAC CGGGCGCGTG 
CTGATCCAGA ACGATGTCGA GATCGGCGCC GGCACAACCA TCGATCGCGG CAGCCTGCGC 
GACACGGTGA TCGGGGAGGG GACCAAAATC GACAACCAGG TCCAGATCGG CCATAACGTG 
ACGATCGGCC GACGCTGTCT GCTGGCGGCC CAAATCGGCT TGGCGGGTAG CTTGACGATC 
GGCGACAACG TGGCGCTGGG CGCCAAGGTC GGGATCAATA ACCACCTTCA CATCGGTGAC 
GGCGCGCAGG TCGTTGCCAT GAGCGGGGTC AAGGACGATA TCCCTCCAAA CGGCCGCTGG 
GGCGGTTATT TCGCGAAACC GACCAGGCAG TGGTACCGCG AGCTCTTTGC GGTGGAGCGC 
TTGGCGCGCG ATGGTGCGCC CAACGCCGGA TCGGCCACGC CAGATCCAAC GGATCGAGGT 
GCATGA 

 

Protein sequence

MTQPAFFKQP PPLTLVEIAA STGAQLIDAS RGEQRITGLA SLDQAGPMHL TFFDNHKYAA 
QLAATRAGAC FVSPRFEASV PGHVAVLRSA APFRAFVRIA RDCHADTLRP QSWFDNATIA 
ASAVVHPSAH LEDAVVVDPL AVIGPGVEIG TGSVIGSGAV IGPGVRIGRN CNVGAGTTIQ 
VALIGNNVLI HPGCHIGQDG YGFIFFGSEG HVKVPQTGRV LIQNDVEIGA GTTIDRGSLR 
DTVIGEGTKI DNQVQIGHNV TIGRRCLLAA QIGLAGSLTI GDNVALGAKV GINNHLHIGD 
GAQVVAMSGV KDDIPPNGRW GGYFAKPTRQ WYRELFAVER LARDGAPNAG SATPDPTDRG 
A