| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1702 |
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| Symbol | |
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| ID | 4029406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1901343 |
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| End bp | 1903874 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637970174 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_576978 |
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| Protein GI | 92117249 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTTG GAATGCGAGT GTTAAGGGGG ACACTGCTCG CCGCCCTGAT GGCCGTCGCC
GTGCCGGTCG CCGCGTTCGT GACCGTCCCT CTGGTGTCGT CGCCAGCTGC CGCCCAGACC
CTGTCGTCGA TTTCCGTCGA AGGAAACCGT CGGGTCGAGC TGGAGACGAT CCGTTCGTAT
TTCAAGCCGG ATGCCAACGG GCGCCTTGAC CAGGCGAGCA TCGACGACGC GTTGAAAGCG
CTGATCGGGA CCGGTCTGTT CCAGGACGTC AGGATCAACC GTGTCGGCGG CCGGCTCGTG
GTCTCGGTCG TGGAAAATCC GGTCATCAAC CGGGTCGCGT TCGAGGGCAA CAAGAAGGTC
AAGGACGAGC AACTGACGGC GGAAATTCAG TCCAAGCCGC GCGGTACGTT CTCCCGACCG
ATGGTCCAGT CCGACGTCCA GCGAATCGTT GAAATCTATC GCCACTCCGG CCGCTACGAT
GTGAGCGTTA CCCCAGAGAT CATCGAGCAA CCCAACAACC GCGTCGATCT CGTTTTTTCG
ATCAGCGAAG GCGGCAAGAC CGGCGTCAAA TCGGTCGAGT TCATCGGTAA CCACGCTTTT
TCGTCCTACC GTCTGAAGGA CGTGATCAAG ACGCATGAGT CGAACTTCCT GAGCTTCCTC
GGTGGCGGGG ACGTGTATGA TCCCGACCGC GTCGAGGCCG ACCGTGACTT GCTGCGCCGC
TATTATCTGA AGCACGGCTA TGCGGACGTT CAGATCGTTG CCGCCTTGAC CGAATACGAT
CCCGCTCGCC ACGGGTTCCT CGTGACCTTC AAGATCGACG AAGGCCAGCA ATACCGCGTC
GGGTCGGTGA CATTCGAATC GTCGATTCCG GCGCTCGACG GAAAGTCACT GAGCGGCTTT
TCGCACGTCC ACGTCGGGTC GCTCTATAAC GCCGAAGCGC TCGAGAAATC CGTCGAGGAG
ATGCAGGTCG AAACGTCGCG GCGCGGATAT GCCTTCGCCG TGGTGCGCCC GCGAGGTGAT
CGCAACTTCG ATGCCCATAC CGTCTCGATC GTATTCGCGA TCGACGAAGG CCCGAGGACG
TATATCGAGC GCATCAACAT CAGAGGCAAC ACGCGGACGC GGGACTATGT GATCCGGCGC
GAGTTCGATA TTTCGGAAGG CGACGCCTAC AATCGATCGC TGGTGGATCG TGCCGAGCGC
CGCCTGAAGA ACCTCGATTT CTTCAAGACG GTCAAGATCA CGACCGAGCC GGGGTCATCC
AGCGATCGCG TGATTCTCGA CGTCGACGTC GAGGATAAGT CGACCGGTGA CTTCTCGGTG
TCCGGCGGCT ATTCGACGAC CCAGGGCGCA CTCGCGGAAG TCAGCGTCTC GGAGCGTAAC
CTGCTGGGCC GCGGTCTGTA TGCGAAGGCC TCGGTTCAGT ACGGGCAGTA CGCACGGGGA
TATTCGCTGT CGTTTGTCGA GCCCTACCTG CTGGACTATC GGGTCGCGCT CGGGCTTGAT
TTCTACCAGC GTGAGCAGCT CGCCAACCAA TACATCTCCT ATAACATCAA GACGCTCGGA
TTCAGCCCGC GGCTCGGCTT CGGCCTGCGG GAGGATCTGA CACTGCAATT GCGTTATTCG
ATCTTCCGGC AGGAAATCGG GCTACCAACA TCCCTGCGGA ACTGTAACAA CAACATTGGC
GGTCCGAACT ACAATCCGTC ACCAGCATTC CTGAATTCAA TCGGCCAATT CAATCCGAAT
AATCCGACCC TCGGCTGTTA CTCCGATGGC GAAGCGTCGC TGCCAATCCG CCAGGAGTTG
GGCGGCCAGA CGCTGACCTC GATGCTCGGC TACACGCTGA CCTACAACAC CCTCGACAAC
AACAAGAACC CGACCGACGG TCTTCTGATT GATTTCAGGC AGGACTTTGC CGGTGTCGGT
GGTGACGTCA AATATTTGAA GACGGCGATC GATGCGAAGT ACTATCAGCC GCTGGTCTCG
GACATCGTCG GTCTGGTCCA TCTGCAAGGC GGTATTCTGA ACAATGTTGG CGCTTACGCC
GGACAGAACG GAATTCGCAT GCTGGATAAT TTCCAGATGG GGCCCAATCT GGTTCGCGGC
TTCGCACCGA ACGGCATCGG TCCGCGCGAT ATCAATTTTC TGAGCACGAT GGATGCTTTG
GGTGGCACCC AGTACTGGGG CGCTTCGGTC GAGTTGCAGA TGCCGTTCTG GTTCCTGCCG
AAGGAAGTAG GCTTGAAGGG TGCCGTTTAC GCGGACGCCG GTTCACTCTG GGGCTACAAG
GGACCGACGT CTAACTTGGC GACCAATGAA TTCAATGCGC CGGGCTGTAT GCCAAGTACG
TCGCGCAGCA ATCCTGGCAC CTGTGCCGGT CTTCAGTTTG ACGACACCAA CGTGGTCCGG
ACCTCGGTCG GTGTCGGCCT GATCTGGCAG TCTCCGTTCG GCCCGCTCCG CTTCGACTAC
GCCGTGCCGA TCACAAAGGG CAAGTACGAC CGGGTGCAGG AGTTCAGGTT TGGCGGCGGA
ACGACGTTCT GA
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| Protein sequence | MNVGMRVLRG TLLAALMAVA VPVAAFVTVP LVSSPAAAQT LSSISVEGNR RVELETIRSY
FKPDANGRLD QASIDDALKA LIGTGLFQDV RINRVGGRLV VSVVENPVIN RVAFEGNKKV
KDEQLTAEIQ SKPRGTFSRP MVQSDVQRIV EIYRHSGRYD VSVTPEIIEQ PNNRVDLVFS
ISEGGKTGVK SVEFIGNHAF SSYRLKDVIK THESNFLSFL GGGDVYDPDR VEADRDLLRR
YYLKHGYADV QIVAALTEYD PARHGFLVTF KIDEGQQYRV GSVTFESSIP ALDGKSLSGF
SHVHVGSLYN AEALEKSVEE MQVETSRRGY AFAVVRPRGD RNFDAHTVSI VFAIDEGPRT
YIERINIRGN TRTRDYVIRR EFDISEGDAY NRSLVDRAER RLKNLDFFKT VKITTEPGSS
SDRVILDVDV EDKSTGDFSV SGGYSTTQGA LAEVSVSERN LLGRGLYAKA SVQYGQYARG
YSLSFVEPYL LDYRVALGLD FYQREQLANQ YISYNIKTLG FSPRLGFGLR EDLTLQLRYS
IFRQEIGLPT SLRNCNNNIG GPNYNPSPAF LNSIGQFNPN NPTLGCYSDG EASLPIRQEL
GGQTLTSMLG YTLTYNTLDN NKNPTDGLLI DFRQDFAGVG GDVKYLKTAI DAKYYQPLVS
DIVGLVHLQG GILNNVGAYA GQNGIRMLDN FQMGPNLVRG FAPNGIGPRD INFLSTMDAL
GGTQYWGASV ELQMPFWFLP KEVGLKGAVY ADAGSLWGYK GPTSNLATNE FNAPGCMPST
SRSNPGTCAG LQFDDTNVVR TSVGVGLIWQ SPFGPLRFDY AVPITKGKYD RVQEFRFGGG
TTF
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