Gene Nham_1682 details

Gene Information

• Locus tag: Nham_1682
• ID: 4032935
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1879772
• End bp: 1880356
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637970155
• Product: NnrU
• Protein accession: YP_576959
• Protein GI: 92117230
• COG category: [S] Function unknown
• COG ID: [COG4094] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.262721
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACTAT CGGTGATGAT TGCTGGCCTT GTTCTGTTCC TCGGTGTGCA CCTCGCCACG 
ACACGGCGCG ATTTTCGTAA GCGGTTGATC TCGTCCTATG GCGAAGGACC ATACAAGATG 
GGGTTTTCGC TGATTTCCGC GGCTGGTGTC GCGCTGATCG TCTGGGGATT CCTGACCTAT 
CGCGCCACCG GCTGGATCGA CGTCTGGTAT CCGCCGCGGG TGATGAAGCA CATCGCCGAA 
GCGCTGATAC TGCCCGCGAT CATCCTGGTG GTGGCGTCGT ATATCCGTGG CCGCATCTAT 
GCGAAGCTGA AGCATCCGAT GTTGGCAGGC GTCAAGCTGT GGGCGGCGGC GCATCTGCTC 
GCCAACGGCG ATCTTGGCTC GATCATTCTG TTCGGCTCGA TCCTGGCGTG GGCGGTGATC 
GACCGCATCT CGCTCAAGCA CCGGACCGAC CCCAGCGGGT TGCAGATTCC GGTTGGCGGG 
GTTCGCAACG ACGTGATCGC GATTGTCGTC GGCTTCGTCG TCTATCTTGC GCTCGGCCTT 
CTCTTCCATC CTTACGTCGT CGGCGTTCCC GCCTTTGGAG CATAG 

 

Protein sequence

MGLSVMIAGL VLFLGVHLAT TRRDFRKRLI SSYGEGPYKM GFSLISAAGV ALIVWGFLTY 
RATGWIDVWY PPRVMKHIAE ALILPAIILV VASYIRGRIY AKLKHPMLAG VKLWAAAHLL 
ANGDLGSIIL FGSILAWAVI DRISLKHRTD PSGLQIPVGG VRNDVIAIVV GFVVYLALGL 
LFHPYVVGVP AFGA